Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH61328 | Soybean | nucleus | 91.3 | 93.75 |
| VIT_18s0001g10160.t01 | Wine grape | nucleus | 70.87 | 77.25 |
| KRH15387 | Soybean | nucleus | 72.17 | 71.86 |
| PGSC0003DMT400020662 | Potato | nucleus | 71.3 | 68.05 |
| Solyc04g078650.2.1 | Tomato | nucleus, plastid | 71.3 | 67.77 |
| KRH05655 | Soybean | nucleus | 70.43 | 66.39 |
| AT1G46480.1 | Thale cress | nucleus | 59.13 | 54.18 |
| CDY02582 | Canola | nucleus | 27.83 | 52.89 |
| CDY17046 | Canola | nucleus | 57.83 | 51.95 |
| CDY40847 | Canola | nucleus | 57.39 | 51.76 |
| Bra014055.1-P | Field mustard | nucleus | 57.39 | 51.36 |
| Bra032212.1-P | Field mustard | nucleus | 55.22 | 50.6 |
| CDY43848 | Canola | nucleus | 55.22 | 50.6 |
| CDY25659 | Canola | nucleus | 54.78 | 50.2 |
| KRH73152 | Soybean | nucleus | 23.04 | 29.94 |
| KRG97769 | Soybean | nucleus | 21.3 | 28.16 |
| KRH31116 | Soybean | nucleus | 21.3 | 27.22 |
| KRG99904 | Soybean | nucleus | 24.78 | 27.14 |
| KRH10279 | Soybean | nucleus | 25.65 | 26.94 |
| KRH49082 | Soybean | nucleus | 24.35 | 26.67 |
| KRH23053 | Soybean | nucleus | 23.91 | 25.94 |
| KRH41831 | Soybean | nucleus | 26.09 | 25.21 |
| KRH29810 | Soybean | nucleus | 26.09 | 22.99 |
| KRH28790 | Soybean | nucleus | 25.22 | 20.07 |
| KRH76665 | Soybean | nucleus | 25.22 | 19.59 |
| KRH24809 | Soybean | nucleus | 26.96 | 18.96 |
| KRH60534 | Soybean | nucleus | 29.13 | 18.66 |
| KRH50388 | Soybean | nucleus | 25.65 | 17.72 |
| KRH48612 | Soybean | nucleus | 27.39 | 17.65 |
| KRG89341 | Soybean | nucleus | 25.65 | 17.51 |
| KRH60910 | Soybean | nucleus | 15.22 | 16.83 |
| KRH39103 | Soybean | nucleus | 23.04 | 16.51 |
| KRH51590 | Soybean | nucleus | 14.78 | 15.53 |
| KRG94925 | Soybean | nucleus | 16.96 | 13.93 |
| KRH70496 | Soybean | nucleus | 15.65 | 13.74 |
| KRH64971 | Soybean | nucleus | 16.96 | 13.22 |
| KRH01611 | Soybean | nucleus | 15.22 | 13.16 |
| KRH36192 | Soybean | nucleus | 15.65 | 12.81 |
| KRG90565 | Soybean | nucleus | 14.78 | 11.97 |
| KRH50138 | Soybean | nucleus | 19.57 | 11.6 |
| KRH20358 | Soybean | nucleus | 19.13 | 11.31 |
| KRH30862 | Soybean | nucleus | 18.7 | 10.75 |
| KRH32713 | Soybean | nucleus | 18.7 | 10.67 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100781015 | MapMan:15.5.3.6 | EMBL:ACUP02003403 | EMBL:BT096528 | UniProt:C6TFY4 |
| EnsemblPlantsGene:GLYMA_06G041800 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 |
| EnsemblPlants:KRH52024 | ProteinID:KRH52024 | ProteinID:KRH52024.1 | PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF263 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0001B16842 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr6:-:3161791..3163327
Molecular Weight (calculated)
26600.6 Da
IEP (calculated)
9.246
GRAVY (calculated)
-0.972
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSMKVHQFT RGFCWEHEPF LTLGCKRLRP LAPKLPNTQT NTIPTTPSVP FDLKSFIRPE SGPRKPVSSD DSKKDPPSPQ GQVETHPGGT RWNPTQEQIG
101: ILEMLYKGGI RTPNAQQIEQ ITVQLGKYGK IEGKNVFYWF QNHKARERQK QKRNSLAFSH SPRTHTIHSI VTLETTRGEV VERDHEEDSP YKKKCRRWVF
201: ECLEEQNMSS ACEQEEHRTL ELFPLHPEGR
101: ILEMLYKGGI RTPNAQQIEQ ITVQLGKYGK IEGKNVFYWF QNHKARERQK QKRNSLAFSH SPRTHTIHSI VTLETTRGEV VERDHEEDSP YKKKCRRWVF
201: ECLEEQNMSS ACEQEEHRTL ELFPLHPEGR
001: MKVHEFSNGF SSSWDQHDST SSLSLSCKRL RPLAPKLSGS PPSPPSSSSG VTSATFDLKN FIRPDQTGPT KFEHKRDPPH QLETHPGGTR WNPTQEQIGI
101: LEMLYKGGMR TPNAQQIEHI TLQLGKYGKI EGKNVFYWFQ NHKARERQKQ KRNNLISLSC QSSFTTTGVF NPSVTMKTRT SSSLDIMREP MVEKEELVEE
201: NEYKRTCRSW GFENLEIENR RNKNSSTMAT TFNKIIDNVT LELFPLHPEG R
101: LEMLYKGGMR TPNAQQIEHI TLQLGKYGKI EGKNVFYWFQ NHKARERQKQ KRNNLISLSC QSSFTTTGVF NPSVTMKTRT SSSLDIMREP MVEKEELVEE
201: NEYKRTCRSW GFENLEIENR RNKNSSTMAT TFNKIIDNVT LELFPLHPEG R
Arabidopsis Description
WOX4WUSCHEL-related homeobox 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7J9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.