Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0564500-00 | Rice | mitochondrion, nucleus, peroxisome | 15.17 | 90.77 |
| KRH50138 | Soybean | nucleus | 89.46 | 89.69 |
| Os07t0533201-00 | Rice | mitochondrion, nucleus, peroxisome | 14.91 | 89.23 |
| KRH30862 | Soybean | nucleus | 59.38 | 57.75 |
| KRH32713 | Soybean | nucleus | 58.61 | 56.58 |
| HORVU1Hr1G087950.1 | Barley | nucleus | 18.51 | 55.81 |
| Solyc02g077390.1.1 | Tomato | nucleus | 49.1 | 53.35 |
| VIT_10s0003g00560.t01 | Wine grape | nucleus | 53.47 | 50.49 |
| PGSC0003DMT400027850 | Potato | nucleus | 43.19 | 50.45 |
| AT2G33880.2 | Thale cress | nucleus | 45.76 | 45.88 |
| CDY69228 | Canola | nucleus | 44.47 | 44.36 |
| CDY17211 | Canola | nucleus | 44.22 | 44.1 |
| Bra005464.1-P | Field mustard | nucleus | 44.22 | 44.1 |
| Bra022960.1-P | Field mustard | nucleus | 44.47 | 44.02 |
| CDX79549 | Canola | nucleus | 44.47 | 43.58 |
| CDX87744 | Canola | nucleus | 35.22 | 42.81 |
| CDY48780 | Canola | nucleus | 34.96 | 42.5 |
| Bra022008.1-P | Field mustard | nucleus | 32.9 | 41.56 |
| AT5G45980.1 | Thale cress | nucleus | 34.7 | 41.54 |
| GSMUA_Achr9P06660_001 | Banana | nucleus | 40.1 | 40.31 |
| GSMUA_Achr8P27170_001 | Banana | nucleus | 43.44 | 37.81 |
| KRG94925 | Soybean | nucleus | 23.91 | 33.21 |
| KRH64971 | Soybean | nucleus | 24.42 | 32.2 |
| Os01t0667400-02 | Rice | plastid | 39.59 | 28.89 |
| KXG22537 | Sorghum | plastid | 36.76 | 28.83 |
| Zm00001d039017_P001 | Maize | nucleus | 34.7 | 27.38 |
| TraesCS1A01G399400.1 | Wheat | nucleus | 33.16 | 26.54 |
| OQU87296 | Sorghum | plastid | 35.99 | 26.27 |
| TraesCS1D01G406900.1 | Wheat | nucleus | 32.65 | 26.13 |
| TraesCS1B01G427400.1 | Wheat | nucleus, plastid | 32.39 | 25.98 |
| KRH73152 | Soybean | nucleus | 11.57 | 25.42 |
| KRG97769 | Soybean | nucleus | 11.31 | 25.29 |
| TraesCS3B01G272200.1 | Wheat | nucleus, plastid | 33.42 | 25.24 |
| TraesCS3D01G244300.1 | Wheat | nucleus, plastid | 33.16 | 25.15 |
| TraesCS3A01G247200.1 | Wheat | nucleus, plastid | 33.16 | 25.05 |
| KRH31116 | Soybean | nucleus | 11.57 | 25.0 |
| HORVU3Hr1G060950.1 | Barley | nucleus, plastid | 32.39 | 24.42 |
| KRH15387 | Soybean | nucleus | 12.08 | 20.35 |
| KRH61328 | Soybean | nucleus | 11.57 | 20.09 |
| KRH52024 | Soybean | nucleus | 11.31 | 19.13 |
| KRH05655 | Soybean | nucleus | 11.83 | 18.85 |
| KRH60910 | Soybean | nucleus | 10.03 | 18.75 |
| KRH10279 | Soybean | nucleus | 10.54 | 18.72 |
| KRH23053 | Soybean | nucleus | 9.77 | 17.92 |
| KRH51590 | Soybean | nucleus | 10.03 | 17.81 |
| KRH28790 | Soybean | nucleus | 12.85 | 17.3 |
| KRH76665 | Soybean | nucleus | 13.11 | 17.23 |
| KRG99904 | Soybean | nucleus | 9.25 | 17.14 |
| KRH49082 | Soybean | nucleus | 9.25 | 17.14 |
| KRH70496 | Soybean | nucleus | 11.31 | 16.79 |
| KRH01611 | Soybean | nucleus | 11.31 | 16.54 |
| KRH36192 | Soybean | nucleus | 11.83 | 16.37 |
| KRH39103 | Soybean | nucleus | 12.6 | 15.26 |
| KRH41831 | Soybean | nucleus | 9.25 | 15.13 |
| KRH29810 | Soybean | nucleus | 10.03 | 14.94 |
| KRH48612 | Soybean | nucleus | 13.37 | 14.57 |
| KRH60534 | Soybean | nucleus | 13.11 | 14.21 |
| KRG90565 | Soybean | nucleus | 10.28 | 14.08 |
| KRH50388 | Soybean | nucleus | 11.57 | 13.51 |
| KRG89341 | Soybean | nucleus | 11.31 | 13.06 |
| KRH24809 | Soybean | nucleus | 10.28 | 12.23 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100778000 | MapMan:15.5.3.6 | EMBL:ACUP02008255 | EnsemblPlantsGene:GLYMA_13G172700 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | UniProt:I1M048 | InterPro:IPR001356 | EnsemblPlants:KRH20358 |
| ProteinID:KRH20358 | ProteinID:KRH20358.1 | PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF212 |
| SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI000233D4A9 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr13:+:28671831..28675231
Molecular Weight (calculated)
43251.4 Da
IEP (calculated)
7.481
GRAVY (calculated)
-0.609
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSNRHWPS MFKSKPCNNP HNQWHHDINS SIVSTGCQRS PYANSGGDER TPEPKPRWNP KPEQIRILEA IFNSGMVNPP RDEIRKIRVQ LQEYGQVGDA
101: NVFYWFQNRK SRSKHKLRHF QNTKNQNNAE AQQQHRVDAS SSLSQTTPLS SSSSSSDKSS SKELAYNPNG FSFGFSNVND VAVPNSPTAS VNQTYFHPHN
201: HSDNNLLPQE PFSFTMHNNN GQGFVDNNTI TTLGFSVPQF SSNMMQSQLQ CQQNVGSCTS LLLSEIMSHG TFSKKDQDKA LKIMHPQLSN FPLTSTPTTI
301: IAPPISTVLD PSPITQLEGV GEVAAGDRAK CITVFINDVV FEIVMGPFNV RQAFGDEAVL IHSSGNPVPT DEWGITLHPL HHGACYYLV
101: NVFYWFQNRK SRSKHKLRHF QNTKNQNNAE AQQQHRVDAS SSLSQTTPLS SSSSSSDKSS SKELAYNPNG FSFGFSNVND VAVPNSPTAS VNQTYFHPHN
201: HSDNNLLPQE PFSFTMHNNN GQGFVDNNTI TTLGFSVPQF SSNMMQSQLQ CQQNVGSCTS LLLSEIMSHG TFSKKDQDKA LKIMHPQLSN FPLTSTPTTI
301: IAPPISTVLD PSPITQLEGV GEVAAGDRAK CITVFINDVV FEIVMGPFNV RQAFGDEAVL IHSSGNPVPT DEWGITLHPL HHGACYYLV
001: MASSNRHWPS MFKSKPHPHQ WQHDINSPLL PSASHRSSPF SSGCEVERSP EPKPRWNPKP EQIRILEAIF NSGMVNPPRE EIRRIRAQLQ EYGQVGDANV
101: FYWFQNRKSR SKHKLRLLHN HSKHSLPQTQ PQPQPQPSAS SSSSSSSSSS KSTKPRKSKN KNNTNLSLGG SQMMGMFPPE PAFLFPVSTV GGFEGITVSS
201: QLGFLSGDMI EQQKPAPTCT GLLLSEIMNG SVSYGTHHQQ HLSEKEVEEM RMKMLQQPQT QICYATTNHQ IASYNNNNNN NNIMLHIPPT TSTATTITTS
301: HSLATVPSTS DQLQVQADAR IRVFINEMEL EVSSGPFNVR DAFGEEVVLI NSAGQPIVTD EYGVALHPLQ HGASYYLVLF PLYFPLLY
101: FYWFQNRKSR SKHKLRLLHN HSKHSLPQTQ PQPQPQPSAS SSSSSSSSSS KSTKPRKSKN KNNTNLSLGG SQMMGMFPPE PAFLFPVSTV GGFEGITVSS
201: QLGFLSGDMI EQQKPAPTCT GLLLSEIMNG SVSYGTHHQQ HLSEKEVEEM RMKMLQQPQT QICYATTNHQ IASYNNNNNN NNIMLHIPPT TSTATTITTS
301: HSLATVPSTS DQLQVQADAR IRVFINEMEL EVSSGPFNVR DAFGEEVVLI NSAGQPIVTD EYGVALHPLQ HGASYYLVLF PLYFPLLY
Arabidopsis Description
WOX9WOX9A [Source:UniProtKB/TrEMBL;Acc:A0A178VQA8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.