Factsheet for GSMUA_Achr9P06660_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0564500-00	Rice	mitochondrion, nucleus, peroxisome	15.5	92.31
Os07t0533201-00	Rice	mitochondrion, nucleus, peroxisome	15.25	90.77
GSMUA_Achr8P27170_001	Banana	nucleus	67.18	58.17
HORVU1Hr1G087950.1	Barley	nucleus	17.83	53.49
Solyc02g077390.1.1	Tomato	nucleus	43.93	47.49
VIT_10s0003g00560.t01	Wine grape	nucleus	47.8	44.9
KRH30862	Soybean	nucleus	45.48	44.0
PGSC0003DMT400027850	Potato	nucleus	36.95	42.94
KRH32713	Soybean	nucleus	44.19	42.43
CDX87744	Canola	nucleus	33.33	40.31
CDY48780	Canola	nucleus	33.33	40.31
KRH20358	Soybean	nucleus	40.31	40.1
KRH50138	Soybean	nucleus	40.05	39.95
Bra022008.1-P	Field mustard	nucleus	30.75	38.64
AT5G45980.1	Thale cress	nucleus	31.52	37.54
GSMUA_Achr10P...	Banana	nucleus	20.41	32.38
KXG22537	Sorghum	plastid	38.24	29.84
GSMUA_Achr8P02040_001	Banana	nucleus	9.3	28.12
Zm00001d039017_P001	Maize	nucleus	35.4	27.79
OQU87296	Sorghum	plastid	37.98	27.58
GSMUA_Achr10P...	Banana	nucleus	18.86	27.44
Os01t0667400-02	Rice	plastid	37.73	27.39
GSMUA_Achr6P15910_001	Banana	nucleus	21.71	26.5
TraesCS3B01G272200.1	Wheat	nucleus, plastid	34.11	25.63
TraesCS3A01G247200.1	Wheat	nucleus, plastid	34.11	25.63
TraesCS3D01G244300.1	Wheat	nucleus, plastid	33.85	25.54
HORVU3Hr1G060950.1	Barley	nucleus, plastid	33.85	25.39
GSMUA_Achr5P27730_001	Banana	nucleus	20.41	25.32
TraesCS1A01G399400.1	Wheat	nucleus	31.78	25.31
TraesCS1D01G406900.1	Wheat	nucleus	31.52	25.1
GSMUA_Achr7P07430_001	Banana	nucleus	9.04	24.48
GSMUA_Achr3P09460_001	Banana	nucleus	20.16	24.38
TraesCS1B01G427400.1	Wheat	nucleus, plastid	30.49	24.33
GSMUA_Achr4P29470_001	Banana	nucleus	10.34	24.24
GSMUA_Achr9P05010_001	Banana	nucleus, plastid	21.45	22.86
GSMUA_Achr4P30610_001	Banana	nucleus	10.59	22.28
GSMUA_Achr9P04090_001	Banana	nucleus	10.85	22.22
GSMUA_Achr2P16080_001	Banana	nucleus	11.11	22.16
GSMUA_Achr7P18230_001	Banana	nucleus	10.59	21.24
GSMUA_Achr5P29220_001	Banana	nucleus	10.85	21.0
GSMUA_Achr8P01590_001	Banana	nucleus	21.71	20.0
GSMUA_Achr7P14860_001	Banana	nucleus	9.56	19.47
GSMUA_Achr1P17980_001	Banana	nucleus	10.85	17.72
GSMUA_Achr4P25530_001	Banana	nucleus	9.56	17.54
GSMUA_Achr7P04050_001	Banana	nucleus	10.59	17.52
GSMUA_Achr8P15620_001	Banana	nucleus, plastid	10.59	17.52
GSMUA_Achr5P11080_001	Banana	nucleus	9.56	16.82
GSMUA_Achr10P...	Banana	nucleus	10.08	16.74
GSMUA_AchrUn_...	Banana	nucleus	11.63	15.85
GSMUA_Achr3P14840_001	Banana	nucleus	11.37	15.55
GSMUA_Achr10P...	Banana	nucleus	10.85	15.38

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	EnsemblPlantsGene:GSMUA_Achr9G06660_001	EnsemblPlants:GSMUA_Achr9P06660_001
EnsemblPlants:GSMUA_Achr9T06660_001	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M0TY25	PFAM:PF00046
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF308	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0002963927
SEG:seg	:	:	:	:	:

Description

Putative WUSCHEL-related homeobox 8 [Source:GMGC_GENE;Acc:GSMUA_Achr9G06660_001]

Coordinates

chr9:-:4262739..4264922

Molecular Weight (calculated)

41867.5 Da

IEP (calculated)

8.773

GRAVY (calculated)

-0.357

Length

387 amino acids

Sequence
(BLAST)

001: MASSNRHWPS MFKSKPCNAH HQWQHDINAY QQRTPYASGD GGLFGSFFSV GSNMYNTTFR SIAVPGCEER SPEPKPRWNP KPEQIRILEA IFNSGMVNPP
101: RDEIRRIRAQ LQEYGQVGDA NVFYWFQNRK SRSKNKQRHL QGARLQPRPS VPASPSPPPV TTKPAATAAA TSSSSSSSEQ TTGSDKTLLP VASMGSPLTT
201: TMRSTLPATS MNPMYLNGPG PAEFGIESFL PEGPHGYCFT GTDLMGIVGD ATKVKMQLHH LYGIGASAAG SAATATGVST ASATVTCVNA SARALGDGGA
301: ARSTVFTNEV AFEVAAGPLN IKETFGHEAV LLDHSGHPVL TDEWGVTIHP LQHGACYYLV SFHFPSLQFN MLSRKCHEML MFGHLQV

Best Arabidopsis Sequence Match ( AT2G33880.2 )
(BLAST)

001: MASSNRHWPS MFKSKPHPHQ WQHDINSPLL PSASHRSSPF SSGCEVERSP EPKPRWNPKP EQIRILEAIF NSGMVNPPRE EIRRIRAQLQ EYGQVGDANV
101: FYWFQNRKSR SKHKLRLLHN HSKHSLPQTQ PQPQPQPSAS SSSSSSSSSS KSTKPRKSKN KNNTNLSLGG SQMMGMFPPE PAFLFPVSTV GGFEGITVSS
201: QLGFLSGDMI EQQKPAPTCT GLLLSEIMNG SVSYGTHHQQ HLSEKEVEEM RMKMLQQPQT QICYATTNHQ IASYNNNNNN NNIMLHIPPT TSTATTITTS
301: HSLATVPSTS DQLQVQADAR IRVFINEMEL EVSSGPFNVR DAFGEEVVLI NSAGQPIVTD EYGVALHPLQ HGASYYLVLF PLYFPLLY

Arabidopsis Description

WOX9WOX9A [Source:UniProtKB/TrEMBL;Acc:A0A178VQA8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.