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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 2
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os05t0564500-00 Rice mitochondrion, nucleus, peroxisome 12.3 93.85
Zm00001d039017_P001 Maize nucleus 83.47 83.98
HORVU1Hr1G087950.1 Barley nucleus 14.31 55.04
TraesCS1D01G406900.1 Wheat nucleus 37.5 38.27
GSMUA_Achr9P06660_001 Banana nucleus 29.84 38.24
Solyc02g077390.1.1 Tomato nucleus 27.42 37.99
TraesCS1A01G399400.1 Wheat nucleus 36.29 37.04
KRH20358 Soybean nucleus 28.83 36.76
KRH50138 Soybean nucleus 28.63 36.6
TraesCS1B01G427400.1 Wheat nucleus, plastid 35.69 36.49
PGSC0003DMT400027850 Potato nucleus 24.19 36.04
VIT_10s0003g00560.t01 Wine grape nucleus 29.64 35.68
KRH30862 Soybean nucleus 28.63 35.5
AT5G45980.1 Thale cress nucleus 23.19 35.38
CDX87744 Canola nucleus 22.38 34.69
KRH32713 Soybean nucleus 28.02 34.49
CDY48780 Canola nucleus 22.18 34.38
Bra022008.1-P Field mustard nucleus 21.17 34.09
OQU87296 Sorghum plastid 36.09 33.58
GSMUA_Achr8P27170_001 Banana nucleus 29.23 32.44
KXG24798 Sorghum nucleus 15.12 27.17
OQU90491 Sorghum nucleus 14.11 26.92
KXG39473 Sorghum nucleus 15.52 24.52
OQU87881 Sorghum nucleus 7.66 17.43
OQU82902 Sorghum nucleus 8.27 15.77
EES01660 Sorghum nucleus 8.67 15.47
OQU77281 Sorghum mitochondrion, nucleus 8.47 15.44
OQU82449 Sorghum plastid 7.26 14.69
OQU82514 Sorghum nucleus 9.07 13.76
OQU87830 Sorghum nucleus 8.87 12.94
Protein Annotations
Gene3D:1.10.10.60MapMan:15.5.3.6UniProt:A0A1B6PA40GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634InterPro:Homeobox-like_sf
InterPro:Homeobox_domInterPro:IPR001356EnsemblPlants:KXG22537ProteinID:KXG22537ProteinID:KXG22537.1PFAM:PF00046
PFscan:PS50071PANTHER:PTHR24326PANTHER:PTHR24326:SF308SMART:SM00389EnsemblPlantsGene:SORBI_3009G233000SUPFAM:SSF46689
UniParc:UPI00081AE8F9SEG:seg::::
Description
hypothetical protein
Coordinates
chr9:+:57264786..57269445
Molecular Weight (calculated)
52011.5 Da
IEP (calculated)
6.847
GRAVY (calculated)
-0.165
Length
496 amino acids
Sequence
(BLAST)
001: MASSNRHWPS MYRSSLACNF QQPQPDMNNG GKSSLMSSRC EENGGRNPEP RPRWNPRPEQ IRILEGIFNS GMVNPSRDEI RRIRLQLQEY GPVGDANVFY
101: WFQNRKSRTK HKLRAAGQLQ PSARAALARA CAPPAPVTPP RHLQLAAAAP PPVAPTSSSS SSSDRSSGSS SKSVTPTTAV ALASPVVVQG VIPTTAMDLL
201: TPLPPSAAAL AARQLYYQYQ SQIMAPANAP PMPDLMIASP EPLLPQWQQG EQHYLPATEL GGVLGGHTHT PHEPPAMHRA VSLSPSALFG MCNEALGQDY
301: ADISIVSKGL GHGQFWNNDT TCGSDLSNTK TDAVSAVIRD DEKARLGLFH YYGLAGATNA AAAVASAPLA AAAAADASTA AMLLPSSAPS NAAAATSAAV
401: LTDQLQGLLD AGLLIGETTP PPTATVVAVA RDAVTCAATA TAQFSVPAMR LDVKLAFGEA AVLARQTGEA VPVDESGVTV EPLQQDALYY VLMATN
Best Arabidopsis Sequence Match ( AT5G45980.1 )
(BLAST)
001: MSSSNKNWPS MFKSKPCNNN HHHQHEIDTP SYMHYSNCNL SSSFSSDRIP DPKPRWNPKP EQIRILESIF NSGTINPPRE EIQRIRIRLQ EYGQIGDANV
101: FYWFQNRKSR AKHKLRVHHK SPKMSKKDKT VIPSTDADHC FGFVNQETGL YPVQNNELVV TEPAGFLFPV HNDPSAAQSA FGFGDFVVPV VTEEGMAFST
201: VNNGVNLETN ENFDKIPAIN LYGGDGNGGG NCFPPLTVPL TINQSQEKRD VGLSGGEDVG DNVYPVRMTV FINEMPIEVV SGLFNVKAAF GNDAVLINSF
301: GQPILTDEFG VTYQPLQNGA IYYLI
Arabidopsis Description
WOX8WUSCHEL-related homeobox 8 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7J5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.