Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 2
- nucleus 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Os05t0564500-00 | Rice | mitochondrion, nucleus, peroxisome | 12.3 | 93.85 |
Zm00001d039017_P001 | Maize | nucleus | 83.47 | 83.98 |
HORVU1Hr1G087950.1 | Barley | nucleus | 14.31 | 55.04 |
TraesCS1D01G406900.1 | Wheat | nucleus | 37.5 | 38.27 |
GSMUA_Achr9P06660_001 | Banana | nucleus | 29.84 | 38.24 |
Solyc02g077390.1.1 | Tomato | nucleus | 27.42 | 37.99 |
TraesCS1A01G399400.1 | Wheat | nucleus | 36.29 | 37.04 |
KRH20358 | Soybean | nucleus | 28.83 | 36.76 |
KRH50138 | Soybean | nucleus | 28.63 | 36.6 |
TraesCS1B01G427400.1 | Wheat | nucleus, plastid | 35.69 | 36.49 |
PGSC0003DMT400027850 | Potato | nucleus | 24.19 | 36.04 |
VIT_10s0003g00560.t01 | Wine grape | nucleus | 29.64 | 35.68 |
KRH30862 | Soybean | nucleus | 28.63 | 35.5 |
AT5G45980.1 | Thale cress | nucleus | 23.19 | 35.38 |
CDX87744 | Canola | nucleus | 22.38 | 34.69 |
KRH32713 | Soybean | nucleus | 28.02 | 34.49 |
CDY48780 | Canola | nucleus | 22.18 | 34.38 |
Bra022008.1-P | Field mustard | nucleus | 21.17 | 34.09 |
OQU87296 | Sorghum | plastid | 36.09 | 33.58 |
GSMUA_Achr8P27170_001 | Banana | nucleus | 29.23 | 32.44 |
KXG24798 | Sorghum | nucleus | 15.12 | 27.17 |
OQU90491 | Sorghum | nucleus | 14.11 | 26.92 |
KXG39473 | Sorghum | nucleus | 15.52 | 24.52 |
OQU87881 | Sorghum | nucleus | 7.66 | 17.43 |
OQU82902 | Sorghum | nucleus | 8.27 | 15.77 |
EES01660 | Sorghum | nucleus | 8.67 | 15.47 |
OQU77281 | Sorghum | mitochondrion, nucleus | 8.47 | 15.44 |
OQU82449 | Sorghum | plastid | 7.26 | 14.69 |
OQU82514 | Sorghum | nucleus | 9.07 | 13.76 |
OQU87830 | Sorghum | nucleus | 8.87 | 12.94 |
Protein Annotations
Gene3D:1.10.10.60 | MapMan:15.5.3.6 | UniProt:A0A1B6PA40 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:Homeobox-like_sf |
InterPro:Homeobox_dom | InterPro:IPR001356 | EnsemblPlants:KXG22537 | ProteinID:KXG22537 | ProteinID:KXG22537.1 | PFAM:PF00046 |
PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF308 | SMART:SM00389 | EnsemblPlantsGene:SORBI_3009G233000 | SUPFAM:SSF46689 |
UniParc:UPI00081AE8F9 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:57264786..57269445
Molecular Weight (calculated)
52011.5 Da
IEP (calculated)
6.847
GRAVY (calculated)
-0.165
Length
496 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSNRHWPS MYRSSLACNF QQPQPDMNNG GKSSLMSSRC EENGGRNPEP RPRWNPRPEQ IRILEGIFNS GMVNPSRDEI RRIRLQLQEY GPVGDANVFY
101: WFQNRKSRTK HKLRAAGQLQ PSARAALARA CAPPAPVTPP RHLQLAAAAP PPVAPTSSSS SSSDRSSGSS SKSVTPTTAV ALASPVVVQG VIPTTAMDLL
201: TPLPPSAAAL AARQLYYQYQ SQIMAPANAP PMPDLMIASP EPLLPQWQQG EQHYLPATEL GGVLGGHTHT PHEPPAMHRA VSLSPSALFG MCNEALGQDY
301: ADISIVSKGL GHGQFWNNDT TCGSDLSNTK TDAVSAVIRD DEKARLGLFH YYGLAGATNA AAAVASAPLA AAAAADASTA AMLLPSSAPS NAAAATSAAV
401: LTDQLQGLLD AGLLIGETTP PPTATVVAVA RDAVTCAATA TAQFSVPAMR LDVKLAFGEA AVLARQTGEA VPVDESGVTV EPLQQDALYY VLMATN
101: WFQNRKSRTK HKLRAAGQLQ PSARAALARA CAPPAPVTPP RHLQLAAAAP PPVAPTSSSS SSSDRSSGSS SKSVTPTTAV ALASPVVVQG VIPTTAMDLL
201: TPLPPSAAAL AARQLYYQYQ SQIMAPANAP PMPDLMIASP EPLLPQWQQG EQHYLPATEL GGVLGGHTHT PHEPPAMHRA VSLSPSALFG MCNEALGQDY
301: ADISIVSKGL GHGQFWNNDT TCGSDLSNTK TDAVSAVIRD DEKARLGLFH YYGLAGATNA AAAVASAPLA AAAAADASTA AMLLPSSAPS NAAAATSAAV
401: LTDQLQGLLD AGLLIGETTP PPTATVVAVA RDAVTCAATA TAQFSVPAMR LDVKLAFGEA AVLARQTGEA VPVDESGVTV EPLQQDALYY VLMATN
001: MSSSNKNWPS MFKSKPCNNN HHHQHEIDTP SYMHYSNCNL SSSFSSDRIP DPKPRWNPKP EQIRILESIF NSGTINPPRE EIQRIRIRLQ EYGQIGDANV
101: FYWFQNRKSR AKHKLRVHHK SPKMSKKDKT VIPSTDADHC FGFVNQETGL YPVQNNELVV TEPAGFLFPV HNDPSAAQSA FGFGDFVVPV VTEEGMAFST
201: VNNGVNLETN ENFDKIPAIN LYGGDGNGGG NCFPPLTVPL TINQSQEKRD VGLSGGEDVG DNVYPVRMTV FINEMPIEVV SGLFNVKAAF GNDAVLINSF
301: GQPILTDEFG VTYQPLQNGA IYYLI
101: FYWFQNRKSR AKHKLRVHHK SPKMSKKDKT VIPSTDADHC FGFVNQETGL YPVQNNELVV TEPAGFLFPV HNDPSAAQSA FGFGDFVVPV VTEEGMAFST
201: VNNGVNLETN ENFDKIPAIN LYGGDGNGGG NCFPPLTVPL TINQSQEKRD VGLSGGEDVG DNVYPVRMTV FINEMPIEVV SGLFNVKAAF GNDAVLINSF
301: GQPILTDEFG VTYQPLQNGA IYYLI
Arabidopsis Description
WOX8WUSCHEL-related homeobox 8 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7J5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.