Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0533201-00 | Rice | mitochondrion, nucleus, peroxisome | 16.31 | 81.54 |
| Os05t0564500-00 | Rice | mitochondrion, nucleus, peroxisome | 16.31 | 81.54 |
| CDX87744 | Canola | nucleus | 70.15 | 71.25 |
| CDY48780 | Canola | nucleus | 69.23 | 70.31 |
| Bra022008.1-P | Field mustard | nucleus | 65.23 | 68.83 |
| HORVU1Hr1G087950.1 | Barley | nucleus | 20.62 | 51.94 |
| Solyc02g077390.1.1 | Tomato | nucleus | 42.46 | 38.55 |
| AT2G33880.2 | Thale cress | nucleus | 43.69 | 36.6 |
| PGSC0003DMT400027850 | Potato | nucleus | 36.92 | 36.04 |
| KRH50138 | Soybean | nucleus | 42.15 | 35.31 |
| KRH30862 | Soybean | nucleus | 43.08 | 35.0 |
| KRH20358 | Soybean | nucleus | 41.54 | 34.7 |
| KRH32713 | Soybean | nucleus | 42.15 | 33.99 |
| VIT_10s0003g00560.t01 | Wine grape | nucleus | 42.15 | 33.25 |
| GSMUA_Achr9P06660_001 | Banana | nucleus | 37.54 | 31.52 |
| AT5G17810.2 | Thale cress | nucleus | 24.62 | 29.85 |
| GSMUA_Achr8P27170_001 | Banana | nucleus | 37.85 | 27.52 |
| AT5G05770.1 | Thale cress | nucleus | 10.15 | 27.05 |
| AT3G03660.3 | Thale cress | nucleus, plastid | 25.23 | 25.15 |
| TraesCS1D01G406900.1 | Wheat | nucleus | 34.77 | 23.25 |
| KXG22537 | Sorghum | plastid | 35.38 | 23.19 |
| TraesCS1A01G399400.1 | Wheat | nucleus | 34.46 | 23.05 |
| TraesCS1B01G427400.1 | Wheat | nucleus, plastid | 33.54 | 22.47 |
| Os01t0667400-02 | Rice | plastid | 35.69 | 21.76 |
| OQU87296 | Sorghum | plastid | 35.08 | 21.39 |
| Zm00001d039017_P001 | Maize | nucleus | 32.31 | 21.3 |
| TraesCS3D01G244300.1 | Wheat | nucleus, plastid | 32.62 | 20.66 |
| TraesCS3A01G247200.1 | Wheat | nucleus, plastid | 32.62 | 20.58 |
| TraesCS3B01G272200.1 | Wheat | nucleus, plastid | 32.62 | 20.58 |
| HORVU3Hr1G060950.1 | Barley | nucleus, plastid | 32.62 | 20.54 |
| AT3G11260.1 | Thale cress | nucleus | 11.38 | 20.33 |
| AT1G20700.1 | Thale cress | nucleus | 11.08 | 17.06 |
| AT1G20710.1 | Thale cress | nucleus | 10.15 | 16.75 |
| AT2G01500.1 | Thale cress | nucleus | 13.85 | 16.61 |
| AT1G46480.1 | Thale cress | nucleus | 12.62 | 16.33 |
| AT4G35550.1 | Thale cress | nucleus | 12.92 | 15.67 |
| AT2G28610.1 | Thale cress | nucleus | 11.38 | 15.16 |
| AT2G17950.1 | Thale cress | nucleus | 13.54 | 15.07 |
| AT5G59340.1 | Thale cress | nucleus | 12.0 | 15.0 |
| AT3G18010.1 | Thale cress | nucleus | 13.23 | 12.29 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | EntrezGene:834638 | ProteinID:AED95323.1 | ArrayExpress:AT5G45980 | EnsemblPlantsGene:AT5G45980 |
| RefSeq:AT5G45980 | TAIR:AT5G45980 | RefSeq:AT5G45980-TAIR-G | EnsemblPlants:AT5G45980.1 | TAIR:AT5G45980.1 | EMBL:AY251400 |
| Unigene:At.23155 | ProteinID:BAB08243.1 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008284 | GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 |
| GO:GO:0009987 | GO:GO:0030010 | GO:GO:0048825 | GO:GO:0090451 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom |
| InterPro:IPR001356 | RefSeq:NP_199410.2 | PFAM:PF00046 | PO:PO:0000001 | PO:PO:0000199 | PO:PO:0000423 |
| PO:PO:0001185 | PO:PO:0002002 | PO:PO:0004507 | PO:PO:0020090 | PO:PO:0020094 | PO:PO:0020108 |
| PO:PO:0020109 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF308 | UniProt:Q6X7J5 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI0000158B6C | Symbol:WOX8 | SEG:seg | : | : |
Description
WOX8WUSCHEL-related homeobox 8 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7J5]
Coordinates
chr5:+:18648886..18650836
Molecular Weight (calculated)
36313.7 Da
IEP (calculated)
6.346
GRAVY (calculated)
-0.486
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSNKNWPS MFKSKPCNNN HHHQHEIDTP SYMHYSNCNL SSSFSSDRIP DPKPRWNPKP EQIRILESIF NSGTINPPRE EIQRIRIRLQ EYGQIGDANV
101: FYWFQNRKSR AKHKLRVHHK SPKMSKKDKT VIPSTDADHC FGFVNQETGL YPVQNNELVV TEPAGFLFPV HNDPSAAQSA FGFGDFVVPV VTEEGMAFST
201: VNNGVNLETN ENFDKIPAIN LYGGDGNGGG NCFPPLTVPL TINQSQEKRD VGLSGGEDVG DNVYPVRMTV FINEMPIEVV SGLFNVKAAF GNDAVLINSF
301: GQPILTDEFG VTYQPLQNGA IYYLI
101: FYWFQNRKSR AKHKLRVHHK SPKMSKKDKT VIPSTDADHC FGFVNQETGL YPVQNNELVV TEPAGFLFPV HNDPSAAQSA FGFGDFVVPV VTEEGMAFST
201: VNNGVNLETN ENFDKIPAIN LYGGDGNGGG NCFPPLTVPL TINQSQEKRD VGLSGGEDVG DNVYPVRMTV FINEMPIEVV SGLFNVKAAF GNDAVLINSF
301: GQPILTDEFG VTYQPLQNGA IYYLI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.