Factsheet for AT3G18010.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71075	Canola	nucleus	28.29	81.82
CDX75955	Canola	nucleus	78.57	78.57
CDY66658	Canola	nucleus	78.29	78.06
CDY51928	Canola	nucleus	78.57	77.9
Bra001694.1-P	Field mustard	nucleus	78.57	77.9
Bra022267.1-P	Field mustard	nucleus	78.0	77.78
CDX92182	Canola	nucleus	77.14	76.92
KRH41831	Soybean	nucleus	30.57	44.96
KRH60534	Soybean	nucleus	44.86	43.73
VIT_17s0000g02460.t01	Wine grape	nucleus	40.57	41.28
KRH48612	Soybean	nucleus	40.29	39.5
VIT_01s0011g05020.t01	Wine grape	nucleus	35.43	38.27
KRH39103	Soybean	nucleus	34.86	38.01
AT5G05770.1	Thale cress	nucleus	13.14	37.7
Solyc03g118770.2.1	Tomato	nucleus	40.29	35.88
PGSC0003DMT400014464	Potato	nucleus	39.43	35.29
AT2G01500.1	Thale cress	nucleus	26.29	33.95
AT3G11260.1	Thale cress	nucleus	14.86	28.57
KRG89341	Soybean	nucleus	26.57	27.6
KRH50388	Soybean	nucleus	26.0	27.33
AT1G46480.1	Thale cress	nucleus	18.29	25.5
AT5G59340.1	Thale cress	nucleus	17.71	23.85
AT2G28610.1	Thale cress	nucleus	16.29	23.36
AT2G17950.1	Thale cress	nucleus	17.71	21.23
AT1G20710.1	Thale cress	nucleus	9.43	16.75
AT1G20700.1	Thale cress	nucleus	9.71	16.11
AT4G35550.1	Thale cress	nucleus	11.14	14.55
AT5G45980.1	Thale cress	nucleus	12.29	13.23
AT5G17810.2	Thale cress	nucleus	10.0	13.06
AT2G33880.2	Thale cress	nucleus	14.0	12.63
AT3G03660.3	Thale cress	nucleus, plastid	9.71	10.43

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	EntrezGene:821325	ProteinID:AEE76034.1	ArrayExpress:AT3G18010	EnsemblPlantsGene:AT3G18010
RefSeq:AT3G18010	TAIR:AT3G18010	RefSeq:AT3G18010-TAIR-G	EnsemblPlants:AT3G18010.1	TAIR:AT3G18010.1	EMBL:AY251394
ProteinID:BAB02721.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0099402	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356
RefSeq:NP_188428.3	PFAM:PF00046	PO:PO:0000015	PO:PO:0000293	PO:PO:0001078	PO:PO:0004507
PO:PO:0009006	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF224	UniProt:Q6X7K0	SMART:SM00389
SUPFAM:SSF46689	UniParc:UPI00000A729A	Symbol:WOX1	SEG:seg	:	:

Description

WOX1WUSCHEL-related homeobox 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7K0]

Coordinates

chr3:-:6160733..6163453

Molecular Weight (calculated)

40144.9 Da

IEP (calculated)

7.427

GRAVY (calculated)

-0.960

Length

350 amino acids

Sequence
(BLAST)

001: MWTMGYNEGG ADSFNGGRKL RPLIPRLTSC PTAAVNTNSD HRFNMAVVTM TAEQNKRELM MLNSEPQHPP VMVSSRWNPT PDQLRVLEEL YRQGTRTPSA
101: DHIQQITAQL RRYGKIEGKN VFYWFQNHKA RERQKRRRQM ETGHEETVLS TASLVSNHGF DKKDPPGYKV EQVKNWICSV GCDTQPEKPS RDYHLEEPAN
201: IRVEHNARCG GDERRSFLGI NTTWQMMQLP PSFYSSSHHH HQRNLILNSP TVSSNMSNSN NAVSASKDTV TVSPVFLRTR EATNTETCHR NGDDNKDQEQ
301: HEDCSNGELD HQEQTLELFP LRKEGFCSDG EKDKNISGIH CFYEFLPLKN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.