Factsheet for PGSC0003DMT400014464

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g118770.2.1	Tomato	nucleus	93.86	93.38
KRH60534	Soybean	nucleus	49.36	53.76
KRH48612	Soybean	nucleus	47.57	52.1
CDY71075	Canola	nucleus	15.86	51.24
KRH39103	Soybean	nucleus	41.18	50.16
KRH41831	Soybean	nucleus	29.16	47.9
CDX75955	Canola	nucleus	35.55	39.71
AT3G18010.1	Thale cress	nucleus	35.29	39.43
Bra001694.1-P	Field mustard	nucleus	35.55	39.38
CDY51928	Canola	nucleus	35.55	39.38
CDY66658	Canola	nucleus	34.78	38.75
CDX92182	Canola	nucleus	34.53	38.46
Bra022267.1-P	Field mustard	nucleus	34.53	38.46
PGSC0003DMT400016896	Potato	mitochondrion	10.23	36.36
PGSC0003DMT400053435	Potato	nucleus	14.58	36.31
PGSC0003DMT400020662	Potato	nucleus	18.93	30.71
PGSC0003DMT400065247	Potato	mitochondrion	14.07	27.5
PGSC0003DMT400009157	Potato	nucleus	19.44	26.48
PGSC0003DMT400077947	Potato	nucleus	15.86	26.27
PGSC0003DMT400069529	Potato	nucleus	10.49	16.73
PGSC0003DMT400003980	Potato	nucleus	11.0	15.64
PGSC0003DMT400027850	Potato	nucleus	12.02	14.11

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:102598012	MapMan:15.5.3.6	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005829	GO:GO:0007275	GO:GO:0008150	GO:GO:0099402	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom
InterPro:IPR001356	UniProt:M1A495	PFAM:PF00046	EnsemblPlantsGene:PGSC0003DMG400005670	PGSC:PGSC0003DMG400005670	EnsemblPlants:PGSC0003DMT400014464
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF224	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0002968050
RefSeq:XP_006341531.1	SEG:seg	:	:	:	:

Description

MAEWEST protein [Source:PGSC_GENE;Acc:PGSC0003DMG400005670]

Coordinates

chr3:-:58287033..58289723

Molecular Weight (calculated)

44136.1 Da

IEP (calculated)

7.179

GRAVY (calculated)

-0.918

Length

391 amino acids

Sequence
(BLAST)

001: MWMMGYNDGG DFNMPDSFNG RKLRPLMPRV PHAPTATATN PTNCLRNFHG ENFIALNHHQ LAMSEQNKRD FNTQLVVSSR WNPTPEQLQT LEELYRRGTR
101: TPSAEQIQHI TAQLRRYGKI EGKNVFYWFQ NHKARERQKR RRQLESSANG NGNGGGDDQS HSNCNVENAE RKESGANRTV FEIEQTKHWP SPTNCSTLAE
201: KTAAKTKAAA TAAGATAAGV AESCRVAAAE RWIPFDEGEQ RRTLLAERNA TWQMMHLSCS PPTTTNNTNF ATICSNTNIT TATCTPIIRS CPSTPRTIDH
301: QTKQLFKPKD HLNIFIEPPR CDQKQENIIG DDEEDHGHEA QTLELFPLRS SNDNNDENNF SDKDEIGAAA NLNNNFSGSH YQFFEFLPLK N

Best Arabidopsis Sequence Match ( AT3G18010.1 )
(BLAST)

001: MWTMGYNEGG ADSFNGGRKL RPLIPRLTSC PTAAVNTNSD HRFNMAVVTM TAEQNKRELM MLNSEPQHPP VMVSSRWNPT PDQLRVLEEL YRQGTRTPSA
101: DHIQQITAQL RRYGKIEGKN VFYWFQNHKA RERQKRRRQM ETGHEETVLS TASLVSNHGF DKKDPPGYKV EQVKNWICSV GCDTQPEKPS RDYHLEEPAN
201: IRVEHNARCG GDERRSFLGI NTTWQMMQLP PSFYSSSHHH HQRNLILNSP TVSSNMSNSN NAVSASKDTV TVSPVFLRTR EATNTETCHR NGDDNKDQEQ
301: HEDCSNGELD HQEQTLELFP LRKEGFCSDG EKDKNISGIH CFYEFLPLKN

Arabidopsis Description

WOX1WUSCHEL-related homeobox 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7K0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.