Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022267.1-P | Field mustard | nucleus | 98.29 | 98.29 |
| CDY66658 | Canola | nucleus | 95.73 | 95.73 |
| CDY71075 | Canola | nucleus | 29.06 | 84.3 |
| CDY51928 | Canola | nucleus | 82.62 | 82.15 |
| CDX75955 | Canola | nucleus | 81.48 | 81.71 |
| AT3G18010.1 | Thale cress | nucleus | 76.92 | 77.14 |
| KRH41831 | Soybean | nucleus | 30.77 | 45.38 |
| KRH60534 | Soybean | nucleus | 43.59 | 42.62 |
| VIT_17s0000g02460.t01 | Wine grape | nucleus | 39.89 | 40.7 |
| KRH48612 | Soybean | nucleus | 39.32 | 38.66 |
| KRH39103 | Soybean | nucleus | 34.19 | 37.38 |
| CDY70975 | Canola | nucleus | 17.66 | 37.35 |
| VIT_01s0011g05020.t01 | Wine grape | nucleus | 33.9 | 36.73 |
| Solyc03g118770.2.1 | Tomato | nucleus | 39.32 | 35.11 |
| CDY02582 | Canola | nucleus | 11.97 | 34.71 |
| PGSC0003DMT400014464 | Potato | nucleus | 38.46 | 34.53 |
| CDY41086 | Canola | nucleus | 23.93 | 31.46 |
| CDY01007 | Canola | nucleus | 16.52 | 30.37 |
| CDY04966 | Canola | nucleus | 16.24 | 29.84 |
| CDY08539 | Canola | nucleus | 16.24 | 29.84 |
| CDY14103 | Canola | nucleus | 16.24 | 29.84 |
| CDX70130 | Canola | nucleus | 16.24 | 29.69 |
| CDX98862 | Canola | nucleus | 15.95 | 29.17 |
| KRG89341 | Soybean | nucleus | 25.93 | 27.0 |
| KRH50388 | Soybean | nucleus | 25.36 | 26.73 |
| CDY43848 | Canola | nucleus | 18.52 | 25.9 |
| CDY40847 | Canola | nucleus | 18.8 | 25.88 |
| CDY33728 | Canola | nucleus | 19.94 | 25.45 |
| CDY17046 | Canola | nucleus | 18.52 | 25.39 |
| CDX95764 | Canola | nucleus | 15.95 | 25.23 |
| CDY25659 | Canola | nucleus | 17.95 | 25.1 |
| CDX81686 | Canola | nucleus | 20.51 | 24.83 |
| CDX83299 | Canola | nucleus | 15.95 | 24.78 |
| CDY31716 | Canola | nucleus | 15.95 | 23.93 |
| CDX77191 | Canola | nucleus | 15.95 | 23.73 |
| CDX80277 | Canola | nucleus | 13.11 | 21.9 |
| CDY33030 | Canola | nucleus | 13.11 | 21.9 |
| CDY32648 | Canola | nucleus | 10.83 | 21.71 |
| CDY38144 | Canola | nucleus | 17.38 | 20.2 |
| CDY29212 | Canola | nucleus | 16.81 | 20.07 |
| CDY55370 | Canola | nucleus | 17.09 | 19.87 |
| CDY01358 | Canola | nucleus | 7.41 | 19.55 |
| CDY30337 | Canola | nucleus | 17.38 | 19.3 |
| CDY02885 | Canola | nucleus | 10.83 | 19.1 |
| CDY47803 | Canola | nucleus | 16.24 | 18.87 |
| CDY41648 | Canola | nucleus | 8.83 | 18.13 |
| CDY31870 | Canola | nucleus | 9.69 | 17.44 |
| CDX93197 | Canola | nucleus | 9.69 | 17.44 |
| CDY29511 | Canola | nucleus | 9.4 | 16.26 |
| CDY65899 | Canola | nucleus | 9.12 | 15.31 |
| CDX75511 | Canola | nucleus | 10.83 | 14.84 |
| CDX69148 | Canola | nucleus | 10.54 | 13.96 |
| CDY24814 | Canola | nucleus | 9.4 | 13.81 |
| CDX72546 | Canola | nucleus | 10.26 | 13.79 |
| CDY72488 | Canola | nucleus, plastid | 9.69 | 13.77 |
| CDY40623 | Canola | nucleus | 10.26 | 13.69 |
| CDY16883 | Canola | nucleus | 10.54 | 13.41 |
| CDY38461 | Canola | nucleus | 10.26 | 13.14 |
| CDY48780 | Canola | nucleus | 11.4 | 12.5 |
| CDX87744 | Canola | nucleus | 11.4 | 12.5 |
| CDY29949 | Canola | nucleus | 10.26 | 12.46 |
| CDY21173 | Canola | nucleus | 10.26 | 12.46 |
| CDY02686 | Canola | nucleus | 9.97 | 12.37 |
| CDX79549 | Canola | nucleus | 13.96 | 12.34 |
| CDY17211 | Canola | nucleus | 13.68 | 12.31 |
| CDY69228 | Canola | nucleus | 13.68 | 12.31 |
| CDY51756 | Canola | plastid | 11.4 | 12.27 |
| CDY66087 | Canola | nucleus | 9.69 | 12.14 |
| CDY50656 | Canola | nucleus | 10.83 | 11.21 |
| CDY29211 | Canola | mitochondrion | 3.7 | 8.72 |
Protein Annotations
| EnsemblPlants:CDX92182 | EnsemblPlantsGene:GSBRNA2T00153885001 | Gene3D:1.10.10.60 | GO:A0A078DTH2 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | ncoils:Coil |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF224 | PFAM:PF00046 | PFscan:PS50071 | ProteinID:CDX92182 | ProteinID:CDX92182.1 |
| SEG:seg | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0004EE7126 | MapMan:15.5.3.6 | : |
Description
BnaA05g22250D
Coordinates
chrLK031871:-:673097..675255
Molecular Weight (calculated)
40113.1 Da
IEP (calculated)
8.481
GRAVY (calculated)
-0.936
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MWMMGYNEGG ADSFNGGRKL RPLIPRLSSC PSAAANTNSD HRFNMVMTTL TAEQNKRELM MLNSEHQHPP MMVSSRWNPT PDQLKALEEL YQQGTRTPSA
101: DHIQQITAQL RRYGKIEGKN VFYWFQNHKA RERQKRRRQM ENGHDESVFT TTSLVSNHGF HKKYPPGYKF EQTKNWICSV GCDTQPQKPH ELHHQEEPVS
201: IALPTKGNGR YVGNERQSFP GRNAMSQMMQ LAPGHYPYSR QQQHHHELIL NSTTVTSSFS ASNSTVSAAK DTVTVTPLFL RTRAATNTGT CDDNKDRERH
301: EDCVNGELDH QEKTLELFPL RKEGFCISGG DDGKEKESGI HCFYEFLPLK N
101: DHIQQITAQL RRYGKIEGKN VFYWFQNHKA RERQKRRRQM ENGHDESVFT TTSLVSNHGF HKKYPPGYKF EQTKNWICSV GCDTQPQKPH ELHHQEEPVS
201: IALPTKGNGR YVGNERQSFP GRNAMSQMMQ LAPGHYPYSR QQQHHHELIL NSTTVTSSFS ASNSTVSAAK DTVTVTPLFL RTRAATNTGT CDDNKDRERH
301: EDCVNGELDH QEKTLELFPL RKEGFCISGG DDGKEKESGI HCFYEFLPLK N
001: MWTMGYNEGG ADSFNGGRKL RPLIPRLTSC PTAAVNTNSD HRFNMAVVTM TAEQNKRELM MLNSEPQHPP VMVSSRWNPT PDQLRVLEEL YRQGTRTPSA
101: DHIQQITAQL RRYGKIEGKN VFYWFQNHKA RERQKRRRQM ETGHEETVLS TASLVSNHGF DKKDPPGYKV EQVKNWICSV GCDTQPEKPS RDYHLEEPAN
201: IRVEHNARCG GDERRSFLGI NTTWQMMQLP PSFYSSSHHH HQRNLILNSP TVSSNMSNSN NAVSASKDTV TVSPVFLRTR EATNTETCHR NGDDNKDQEQ
301: HEDCSNGELD HQEQTLELFP LRKEGFCSDG EKDKNISGIH CFYEFLPLKN
101: DHIQQITAQL RRYGKIEGKN VFYWFQNHKA RERQKRRRQM ETGHEETVLS TASLVSNHGF DKKDPPGYKV EQVKNWICSV GCDTQPEKPS RDYHLEEPAN
201: IRVEHNARCG GDERRSFLGI NTTWQMMQLP PSFYSSSHHH HQRNLILNSP TVSSNMSNSN NAVSASKDTV TVSPVFLRTR EATNTETCHR NGDDNKDQEQ
301: HEDCSNGELD HQEQTLELFP LRKEGFCSDG EKDKNISGIH CFYEFLPLKN
Arabidopsis Description
WOX1WUSCHEL-related homeobox 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7K0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.