Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80277 | Canola | nucleus | 97.14 | 97.14 |
| Bra002576.1-P | Field mustard | nucleus | 96.19 | 96.19 |
| CDY02885 | Canola | nucleus | 74.76 | 78.89 |
| CDY32648 | Canola | nucleus | 65.71 | 78.86 |
| AT5G59340.1 | Thale cress | nucleus | 71.43 | 57.69 |
| KRH23053 | Soybean | nucleus | 31.43 | 31.13 |
| Solyc06g076000.1.1 | Tomato | nucleus | 33.81 | 29.58 |
| PGSC0003DMT400077947 | Potato | nucleus | 32.86 | 29.24 |
| KRH10279 | Soybean | nucleus | 29.05 | 27.85 |
| KRH29810 | Soybean | nucleus | 31.9 | 25.67 |
| GSMUA_Achr10P... | Banana | nucleus | 25.71 | 23.18 |
| KRH24809 | Soybean | nucleus | 33.81 | 21.71 |
| CDY71075 | Canola | nucleus | 12.38 | 21.49 |
| CDY04966 | Canola | nucleus | 18.1 | 19.9 |
| CDY14103 | Canola | nucleus | 18.1 | 19.9 |
| CDX95764 | Canola | nucleus | 20.48 | 19.37 |
| CDY70975 | Canola | nucleus | 15.24 | 19.28 |
| CDX98862 | Canola | nucleus | 17.62 | 19.27 |
| CDX70130 | Canola | nucleus | 17.62 | 19.27 |
| CDX83299 | Canola | nucleus | 20.48 | 19.03 |
| CDY01007 | Canola | nucleus | 16.67 | 18.32 |
| CDY08539 | Canola | nucleus | 16.67 | 18.32 |
| CDY02582 | Canola | nucleus | 10.48 | 18.18 |
| CDX77191 | Canola | nucleus | 19.05 | 16.95 |
| CDY31716 | Canola | nucleus | 18.57 | 16.67 |
| CDY41086 | Canola | nucleus | 20.0 | 15.73 |
| CDY40847 | Canola | nucleus | 18.57 | 15.29 |
| CDY17046 | Canola | nucleus | 18.57 | 15.23 |
| CDY43848 | Canola | nucleus | 18.1 | 15.14 |
| CDY25659 | Canola | nucleus | 17.62 | 14.74 |
| CDX92182 | Canola | nucleus | 21.9 | 13.11 |
| CDY33728 | Canola | nucleus | 17.14 | 13.09 |
| CDY51928 | Canola | nucleus | 21.9 | 13.03 |
| CDX75955 | Canola | nucleus | 21.43 | 12.86 |
| CDY66658 | Canola | nucleus | 21.43 | 12.82 |
| CDY01358 | Canola | nucleus | 8.1 | 12.78 |
| CDY29212 | Canola | nucleus | 17.62 | 12.59 |
| CDY38144 | Canola | nucleus | 18.1 | 12.58 |
| CDY55370 | Canola | nucleus | 18.1 | 12.58 |
| CDY47803 | Canola | nucleus | 17.14 | 11.92 |
| CDY41648 | Canola | nucleus | 9.52 | 11.7 |
| CDY30337 | Canola | nucleus | 17.14 | 11.39 |
| CDX81686 | Canola | nucleus | 15.71 | 11.38 |
| CDX93197 | Canola | nucleus | 10.0 | 10.77 |
| CDY31870 | Canola | nucleus | 10.0 | 10.77 |
| CDX87744 | Canola | nucleus | 15.71 | 10.31 |
| CDY48780 | Canola | nucleus | 15.71 | 10.31 |
| CDY29511 | Canola | nucleus | 9.52 | 9.85 |
| CDX75511 | Canola | nucleus | 11.9 | 9.77 |
| CDY24814 | Canola | nucleus | 10.95 | 9.62 |
| CDX72546 | Canola | nucleus | 11.9 | 9.58 |
| CDY65899 | Canola | nucleus | 9.52 | 9.57 |
| CDY40623 | Canola | nucleus | 11.9 | 9.51 |
| CDX69148 | Canola | nucleus | 11.9 | 9.43 |
| CDY16883 | Canola | nucleus | 11.9 | 9.06 |
| CDY38461 | Canola | nucleus | 11.43 | 8.76 |
| CDY29949 | Canola | nucleus | 11.43 | 8.3 |
| CDY21173 | Canola | nucleus | 11.43 | 8.3 |
| CDY02686 | Canola | nucleus | 10.95 | 8.13 |
| CDY72488 | Canola | nucleus, plastid | 9.52 | 8.1 |
| CDY29211 | Canola | mitochondrion | 5.71 | 8.05 |
| CDY66087 | Canola | nucleus | 10.48 | 7.86 |
| CDY51756 | Canola | plastid | 11.43 | 7.36 |
| CDX79549 | Canola | nucleus | 13.81 | 7.3 |
| CDY50656 | Canola | nucleus | 11.43 | 7.08 |
| CDY69228 | Canola | nucleus | 12.86 | 6.92 |
| CDY17211 | Canola | nucleus | 12.38 | 6.67 |
Protein Annotations
| EnsemblPlants:CDY33030 | EnsemblPlantsGene:GSBRNA2T00053259001 | GO:A0A078H367 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:Homeobox_dom |
| InterPro:IPR001356 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF203 | PFAM:PF00046 | ProteinID:CDY33030 | ProteinID:CDY33030.1 |
| SEG:seg | UniParc:UPI0004EECB4C | UniProt:A0A078H367 | MapMan:15.5.3.6 | : | : |
Description
BnaA10g12360DBnaA10g12360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H367]
Coordinates
chrLK032304:-:326734..328017
Molecular Weight (calculated)
23086.7 Da
IEP (calculated)
7.405
GRAVY (calculated)
-0.723
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MENEGSAGTG SSPRWNPTKE QITLLENLYK QGIRTPSADQ IQQITSRLRA HGHIEVGCVN PYYLHQVRDH HNQHGSVYRQ DLHSNKVMLP SGGYEERTTT
101: DHKKHVSDIT TTTARMSMSS SSLRFDRFAL GNHGYFSEGI NVNTNGLKTL PLFPLQPLDA ANDSGVGNSS FSLRHDSPVT YCGDDGGRGQ PFIGFFSSGS
201: SRFDNSGNGL
101: DHKKHVSDIT TTTARMSMSS SSLRFDRFAL GNHGYFSEGI NVNTNGLKTL PLFPLQPLDA ANDSGVGNSS FSLRHDSPVT YCGDDGGRGQ PFIGFFSSGS
201: SRFDNSGNGL
001: MENEVNAGTA SSSRWNPTKD QITLLENLYK EGIRTPSADQ IQQITGRLRA YGHIEGKNVF YWFQNHKARQ RQKQKQERMA YFNRLLHKTS RFFYPPPCSN
101: VGCVSPYYLQ QASDHHMNQH GSVYTNDLLH RNNVMIPSGG YEKRTVTQHQ KQLSDIRTTA ATRMPISPSS LRFDRFALRD NCYAGEDINV NSSGRKTLPL
201: FPLQPLNASN ADGMGSSSFA LGSDSPVDCS SDGAGREQPF IDFFSGGSTS TRFDSNGNGL
101: VGCVSPYYLQ QASDHHMNQH GSVYTNDLLH RNNVMIPSGG YEKRTVTQHQ KQLSDIRTTA ATRMPISPSS LRFDRFALRD NCYAGEDINV NSSGRKTLPL
201: FPLQPLNASN ADGMGSSSFA LGSDSPVDCS SDGAGREQPF IDFFSGGSTS TRFDSNGNGL
Arabidopsis Description
WOX2WUSCHEL-related homeobox 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7K1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.