Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75511 | Canola | nucleus | 92.83 | 96.09 |
| Bra011623.1-P | Field mustard | nucleus | 92.83 | 95.35 |
| CDX72546 | Canola | nucleus | 85.66 | 86.97 |
| CDY40623 | Canola | nucleus | 86.04 | 86.69 |
| CDY41648 | Canola | nucleus | 54.34 | 84.21 |
| AT4G35550.1 | Thale cress | nucleus | 84.91 | 83.96 |
| CDY24814 | Canola | nucleus | 72.83 | 80.75 |
| VIT_04s0044g00150.t01 | Wine grape | nucleus | 52.83 | 58.58 |
| VIT_04s0044g00160.t01 | Wine grape | nucleus | 51.7 | 58.05 |
| GSMUA_Achr4P29470_001 | Banana | nucleus | 35.09 | 56.36 |
| PGSC0003DMT400003980 | Potato | nucleus | 55.47 | 53.45 |
| Solyc02g082670.2.1 | Tomato | nucleus | 55.09 | 53.28 |
| CDY01358 | Canola | nucleus | 26.04 | 51.88 |
| KRH01611 | Soybean | nucleus | 51.7 | 51.5 |
| GSMUA_Achr1P17980_001 | Banana | nucleus | 45.66 | 51.05 |
| KRH70496 | Soybean | nucleus | 49.81 | 50.38 |
| GSMUA_Achr7P04050_001 | Banana | nucleus | 42.64 | 48.29 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.92 | 44.72 |
| GSMUA_Achr5P11080_001 | Banana | nucleus | 36.98 | 44.55 |
| CDY31870 | Canola | nucleus | 31.32 | 42.56 |
| CDX93197 | Canola | nucleus | 31.32 | 42.56 |
| CDY29511 | Canola | nucleus | 32.45 | 42.36 |
| CDY65899 | Canola | nucleus | 33.21 | 42.11 |
| GSMUA_Achr3P14840_001 | Banana | nucleus | 44.15 | 41.34 |
| CDY71075 | Canola | nucleus | 9.43 | 20.66 |
| CDY70975 | Canola | nucleus | 11.7 | 18.67 |
| CDY08539 | Canola | nucleus | 12.83 | 17.8 |
| CDY01007 | Canola | nucleus | 12.83 | 17.8 |
| CDY14103 | Canola | nucleus | 12.08 | 16.75 |
| CDY04966 | Canola | nucleus | 12.08 | 16.75 |
| CDX98862 | Canola | nucleus | 12.08 | 16.67 |
| CDX70130 | Canola | nucleus | 12.08 | 16.67 |
| CDY02582 | Canola | nucleus | 7.55 | 16.53 |
| CDY21173 | Canola | nucleus | 16.6 | 15.22 |
| CDY29949 | Canola | nucleus | 16.6 | 15.22 |
| CDY38461 | Canola | nucleus | 15.47 | 14.96 |
| CDY40847 | Canola | nucleus | 14.34 | 14.9 |
| CDY17046 | Canola | nucleus | 14.34 | 14.84 |
| CDY43848 | Canola | nucleus | 13.96 | 14.74 |
| CDY72488 | Canola | nucleus, plastid | 13.58 | 14.57 |
| CDY16883 | Canola | nucleus | 15.09 | 14.49 |
| CDY02686 | Canola | nucleus | 15.47 | 14.49 |
| CDY66087 | Canola | nucleus | 15.09 | 14.29 |
| CDY31716 | Canola | nucleus | 12.45 | 14.1 |
| CDX95764 | Canola | nucleus | 11.7 | 13.96 |
| CDY25659 | Canola | nucleus | 13.21 | 13.94 |
| CDY41086 | Canola | nucleus | 13.96 | 13.86 |
| CDX87744 | Canola | nucleus | 16.6 | 13.75 |
| CDY48780 | Canola | nucleus | 16.6 | 13.75 |
| CDX83299 | Canola | nucleus | 11.7 | 13.72 |
| CDX77191 | Canola | nucleus | 12.08 | 13.56 |
| CDY33728 | Canola | nucleus | 13.21 | 12.73 |
| CDY51756 | Canola | plastid | 15.47 | 12.58 |
| CDY32648 | Canola | nucleus | 8.3 | 12.57 |
| CDY50656 | Canola | nucleus | 15.85 | 12.39 |
| CDX80277 | Canola | nucleus | 9.81 | 12.38 |
| CDY47803 | Canola | nucleus | 13.96 | 12.25 |
| CDY55370 | Canola | nucleus | 13.58 | 11.92 |
| CDY38144 | Canola | nucleus | 13.58 | 11.92 |
| CDY29212 | Canola | nucleus | 13.21 | 11.9 |
| CDY33030 | Canola | nucleus | 9.43 | 11.9 |
| HORVU1Hr1G087940.1 | Barley | cytosol, plasma membrane, plastid | 10.94 | 11.65 |
| CDY17211 | Canola | nucleus | 16.98 | 11.54 |
| CDY69228 | Canola | nucleus | 16.98 | 11.54 |
| CDX79549 | Canola | nucleus | 16.98 | 11.34 |
| CDY30337 | Canola | nucleus | 13.21 | 11.08 |
| CDY02885 | Canola | nucleus | 8.3 | 11.06 |
| CDX81686 | Canola | nucleus | 12.08 | 11.03 |
| CDX75955 | Canola | nucleus | 13.96 | 10.57 |
| CDY66658 | Canola | nucleus | 13.96 | 10.54 |
| CDX92182 | Canola | nucleus | 13.96 | 10.54 |
| CDY51928 | Canola | nucleus | 13.96 | 10.48 |
| CDY29211 | Canola | mitochondrion | 1.89 | 3.36 |
Protein Annotations
| EnsemblPlants:CDX69148 | EnsemblPlantsGene:GSBRNA2T00130935001 | Gene3D:1.10.10.60 | GO:A0A078C250 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF340 | PFAM:PF00046 | PFscan:PS50071 | ProteinID:CDX69148 | ProteinID:CDX69148.1 | SEG:seg |
| SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0004EB43D4 | MapMan:15.5.3.6 | : | : |
Description
BnaC01g03050D
Coordinates
chrLK031789:-:3172736..3174529
Molecular Weight (calculated)
29252.2 Da
IEP (calculated)
5.903
GRAVY (calculated)
-0.851
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MMEWDNNQQQ QPNNQNSSNL QGIDVSGGGS SSGGMYVKVM TDEQLETLRK QIAIYATICD RLVEMHKTLT SQQDLAGGRL GGLYVDPTIG HKMTARQRWT
101: PTPVQLQILE RIFDQGTGTP SKQKIKDITE ELSQHGQISE QNVYNWFQNR RARSKRKQHG GGGGIGGSNN NNGESEVETE AETLNGKRKM PESLRVLPNG
201: NNGIGTTTGT SPRPEDLCFQ SPEMSSDLHL LGVLSNPRDD HLVGKMGLSE SYNLYDHVED YGMSG
101: PTPVQLQILE RIFDQGTGTP SKQKIKDITE ELSQHGQISE QNVYNWFQNR RARSKRKQHG GGGGIGGSNN NNGESEVETE AETLNGKRKM PESLRVLPNG
201: NNGIGTTTGT SPRPEDLCFQ SPEMSSDLHL LGVLSNPRDD HLVGKMGLSE SYNLYDHVED YGMSG
001: MMEWDNQLQP NNHHSSNLQG IDVNGGSGAG GGMYVKVMTD EQYETLRKQI AIYGTICERL VEMHKTLTAQ QDLAGGRMGG LYADPMMSSL GHKMTARQRW
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
101: TPTPVQLQIL ERIFDQGTGT PSKQKIKDIT EELSQHGQIA EQNVYNWFQN RRARSKRKQH GGGSSGNNNG ESEVETEVEA LNEKRVVRPE SLLGLPDGNS
201: NNNGLGTTTA TTTAPRPEDL CFQSPEISSD LHLLDVLSNP RDEHLVGKMG LAESYNLYDH VEDYGMSG
Arabidopsis Description
WOX13WOX13 [Source:UniProtKB/TrEMBL;Acc:A0A178UZQ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.