Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G013290.3 | Barley | nucleus | 13.65 | 13.03 |
| Solyc02g082670.2.1 | Tomato | nucleus | 14.06 | 12.77 |
| PGSC0003DMT400003980 | Potato | nucleus | 14.06 | 12.73 |
| VIT_04s0044g00160.t01 | Wine grape | nucleus | 11.65 | 12.29 |
| VIT_04s0044g00150.t01 | Wine grape | nucleus | 11.65 | 12.13 |
| HORVU3Hr1G080690.1 | Barley | nucleus | 6.02 | 11.54 |
| GSMUA_Achr1P17980_001 | Banana | nucleus | 10.44 | 10.97 |
| CDX69148 | Canola | nucleus | 11.65 | 10.94 |
| CDX75511 | Canola | nucleus | 10.84 | 10.55 |
| Bra011623.1-P | Field mustard | nucleus | 10.84 | 10.47 |
| CDX72546 | Canola | nucleus | 10.84 | 10.34 |
| Bra017720.1-P | Field mustard | nucleus | 10.84 | 10.19 |
| Bra010531.1-P | Field mustard | nucleus | 9.64 | 10.17 |
| HORVU1Hr1G010580.2 | Barley | nucleus, plastid | 11.24 | 9.96 |
| CDY41648 | Canola | nucleus | 6.83 | 9.94 |
| CDY40623 | Canola | nucleus | 10.44 | 9.89 |
| HORVU5Hr1G022120.1 | Barley | nucleus | 10.84 | 9.78 |
| KRH01611 | Soybean | nucleus | 10.44 | 9.77 |
| AT4G35550.1 | Thale cress | nucleus | 10.44 | 9.7 |
| CDY24814 | Canola | nucleus | 9.24 | 9.62 |
| GSMUA_Achr5P11080_001 | Banana | nucleus | 8.43 | 9.55 |
| KRH70496 | Soybean | nucleus | 10.04 | 9.54 |
| HORVU3Hr1G013330.1 | Barley | nucleus | 7.23 | 9.28 |
| HORVU3Hr1G085050.3 | Barley | nucleus | 7.63 | 9.05 |
| HORVU3Hr1G080660.5 | Barley | nucleus | 9.64 | 8.96 |
| HORVU3Hr1G086450.1 | Barley | nucleus, plastid | 9.64 | 8.76 |
| HORVU3Hr1G060950.1 | Barley | nucleus, plastid | 18.07 | 8.72 |
| GSMUA_Achr4P29470_001 | Banana | nucleus | 5.62 | 8.48 |
| HORVU3Hr1G086430.1 | Barley | nucleus | 9.24 | 8.13 |
| GSMUA_Achr7P04050_001 | Banana | nucleus | 7.63 | 8.12 |
| HORVU5Hr1G049190.2 | Barley | nucleus | 6.02 | 8.06 |
| GSMUA_Achr3P14840_001 | Banana | nucleus | 8.43 | 7.42 |
| GSMUA_AchrUn_... | Banana | nucleus | 8.43 | 7.39 |
| HORVU4Hr1G051530.5 | Barley | nucleus | 10.04 | 7.25 |
| HORVU1Hr1G087950.1 | Barley | nucleus | 3.21 | 6.2 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G087940.1 | EnsemblPlantsGene:HORVU1Hr1G087940 | SEG:seg | UniParc:UPI000B468FFE | UniProt:A0A287GM87 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr1H:-:540693806..540697249
Molecular Weight (calculated)
25411.3 Da
IEP (calculated)
5.393
GRAVY (calculated)
0.095
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: HPMTSMPTQT PVRELVTSTP EPPPLLLQRP PQSQCQYLPA TELGGFLGSH AQSHTHPTAV SPDGHLLSGL FTDSALGQHE IVADMSCSKL LGLGGGGQYC
101: YYNVAAAPPS DAVSAVIKDD EKARLGLLHQ HHYGLGATAG ADVSAAALPC TPPSGNAAAS SAFTDHLQGL LDAGMLAGGG AATVVAVPAG RPDAPVQCYT
201: VPAMARMDVK ALFGPAAVLL WQTGEAVPVD GSGVTAEPLQ NGAIYYVLM
101: YYNVAAAPPS DAVSAVIKDD EKARLGLLHQ HHYGLGATAG ADVSAAALPC TPPSGNAAAS SAFTDHLQGL LDAGMLAGGG AATVVAVPAG RPDAPVQCYT
201: VPAMARMDVK ALFGPAAVLL WQTGEAVPVD GSGVTAEPLQ NGAIYYVLM
001: MSSSNKNWPS MFKSKPCNNN HHHQHEIDTP SYMHYSNCNL SSSFSSDRIP DPKPRWNPKP EQIRILESIF NSGTINPPRE EIQRIRIRLQ EYGQIGDANV
101: FYWFQNRKSR AKHKLRVHHK SPKMSKKDKT VIPSTDADHC FGFVNQETGL YPVQNNELVV TEPAGFLFPV HNDPSAAQSA FGFGDFVVPV VTEEGMAFST
201: VNNGVNLETN ENFDKIPAIN LYGGDGNGGG NCFPPLTVPL TINQSQEKRD VGLSGGEDVG DNVYPVRMTV FINEMPIEVV SGLFNVKAAF GNDAVLINSF
301: GQPILTDEFG VTYQPLQNGA IYYLI
101: FYWFQNRKSR AKHKLRVHHK SPKMSKKDKT VIPSTDADHC FGFVNQETGL YPVQNNELVV TEPAGFLFPV HNDPSAAQSA FGFGDFVVPV VTEEGMAFST
201: VNNGVNLETN ENFDKIPAIN LYGGDGNGGG NCFPPLTVPL TINQSQEKRD VGLSGGEDVG DNVYPVRMTV FINEMPIEVV SGLFNVKAAF GNDAVLINSF
301: GQPILTDEFG VTYQPLQNGA IYYLI
Arabidopsis Description
WOX8WUSCHEL-related homeobox 8 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7J5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.