Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17046 | Canola | nucleus | 96.08 | 95.7 |
| AT1G46480.1 | Thale cress | nucleus | 83.14 | 84.46 |
| CDY02582 | Canola | nucleus | 40.0 | 84.3 |
| CDY43848 | Canola | nucleus | 79.22 | 80.48 |
| CDY25659 | Canola | nucleus | 78.82 | 80.08 |
| VIT_18s0001g10160.t01 | Wine grape | nucleus | 52.94 | 63.98 |
| KRH15387 | Soybean | nucleus | 53.73 | 59.31 |
| KRH61328 | Soybean | nucleus | 50.59 | 57.59 |
| KRH52024 | Soybean | nucleus | 51.76 | 57.39 |
| KRH05655 | Soybean | nucleus | 54.12 | 56.56 |
| PGSC0003DMT400020662 | Potato | nucleus | 49.41 | 52.28 |
| Solyc04g078650.2.1 | Tomato | nucleus, plastid | 49.41 | 52.07 |
| CDY71075 | Canola | nucleus | 14.12 | 29.75 |
| CDY70975 | Canola | nucleus | 19.22 | 29.52 |
| CDY14103 | Canola | nucleus | 20.39 | 27.23 |
| CDX98862 | Canola | nucleus | 20.39 | 27.08 |
| CDY04966 | Canola | nucleus | 20.0 | 26.7 |
| CDX70130 | Canola | nucleus | 20.0 | 26.56 |
| CDX95764 | Canola | nucleus | 21.96 | 25.23 |
| CDY01007 | Canola | nucleus | 18.82 | 25.13 |
| CDX83299 | Canola | nucleus | 21.96 | 24.78 |
| CDY08539 | Canola | nucleus | 18.43 | 24.61 |
| CDY31716 | Canola | nucleus | 21.57 | 23.5 |
| CDX77191 | Canola | nucleus | 21.57 | 23.31 |
| CDY41086 | Canola | nucleus | 21.18 | 20.22 |
| CDX75955 | Canola | nucleus | 27.06 | 19.71 |
| CDY01358 | Canola | nucleus | 10.2 | 19.55 |
| CDY51928 | Canola | nucleus | 27.06 | 19.55 |
| CDY33728 | Canola | nucleus | 20.78 | 19.27 |
| CDY66658 | Canola | nucleus | 26.27 | 19.09 |
| CDX81686 | Canola | nucleus | 21.57 | 18.97 |
| CDY32648 | Canola | nucleus | 12.94 | 18.86 |
| CDX92182 | Canola | nucleus | 25.88 | 18.8 |
| CDY41648 | Canola | nucleus | 12.55 | 18.71 |
| CDY33030 | Canola | nucleus | 15.29 | 18.57 |
| CDY55370 | Canola | nucleus | 21.96 | 18.54 |
| CDY38144 | Canola | nucleus | 21.96 | 18.54 |
| CDY31870 | Canola | nucleus | 14.12 | 18.46 |
| CDX93197 | Canola | nucleus | 14.12 | 18.46 |
| CDY30337 | Canola | nucleus | 22.75 | 18.35 |
| CDY47803 | Canola | nucleus | 21.57 | 18.21 |
| CDX80277 | Canola | nucleus | 14.9 | 18.1 |
| CDY29212 | Canola | nucleus | 20.78 | 18.03 |
| CDY29511 | Canola | nucleus | 14.12 | 17.73 |
| CDY65899 | Canola | nucleus | 13.73 | 16.75 |
| CDY02885 | Canola | nucleus | 12.94 | 16.58 |
| CDX72546 | Canola | nucleus | 15.69 | 15.33 |
| CDY40623 | Canola | nucleus | 15.69 | 15.21 |
| CDY24814 | Canola | nucleus | 14.12 | 15.06 |
| CDY72488 | Canola | nucleus, plastid | 14.51 | 14.98 |
| CDX75511 | Canola | nucleus | 14.9 | 14.84 |
| CDX69148 | Canola | nucleus | 14.9 | 14.34 |
| CDY48780 | Canola | nucleus | 16.47 | 13.12 |
| CDX87744 | Canola | nucleus | 16.47 | 13.12 |
| CDY16883 | Canola | nucleus | 14.12 | 13.04 |
| CDY29949 | Canola | nucleus | 14.12 | 12.46 |
| CDY21173 | Canola | nucleus | 14.12 | 12.46 |
| CDY38461 | Canola | nucleus | 13.33 | 12.41 |
| CDY02686 | Canola | nucleus | 13.73 | 12.37 |
| CDY66087 | Canola | nucleus | 13.33 | 12.14 |
| CDY69228 | Canola | nucleus | 16.86 | 11.03 |
| CDY17211 | Canola | nucleus | 16.86 | 11.03 |
| CDY50656 | Canola | nucleus | 14.51 | 10.91 |
| CDX79549 | Canola | nucleus | 16.86 | 10.83 |
| CDY51756 | Canola | plastid | 13.73 | 10.74 |
| CDY29211 | Canola | mitochondrion | 4.31 | 7.38 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | GO:A0A078HSM4 | UniProt:A0A078HSM4 | EnsemblPlants:CDY40847 | ProteinID:CDY40847 |
| ProteinID:CDY40847.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00071811001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom |
| InterPro:IPR001356 | PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF263 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI0001BA927E | SEG:seg | : | : | : |
Description
BnaC08g04810DBnaC08g04810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HSM4]
Coordinates
chrLK032481:-:168982..170191
Molecular Weight (calculated)
28914.0 Da
IEP (calculated)
9.914
GRAVY (calculated)
-0.817
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVHEFSNGF SSWEQHDSPS SLSLSCKRLR PLGPKLSGSP CSPSSSSGVT SATFDLKSFI KPDQTGPRKF EYSIEHQRDL PHVGTHQGGT RWNPTQEQIG
101: ILEMLYKGGM RTPNAQQIEN ITSQLGKYGK IEGKNVFYWF QNHKARERQK QKRNNFISLS CLSSFKTTNI NNASVTTKTT TSSNDVIRRD SMVEKGELVE
201: EAEYKRTCRS WGFENLEIDS RRNINSSKNA TMATTFNKII ENVTLELFPL HPEGR
101: ILEMLYKGGM RTPNAQQIEN ITSQLGKYGK IEGKNVFYWF QNHKARERQK QKRNNFISLS CLSSFKTTNI NNASVTTKTT TSSNDVIRRD SMVEKGELVE
201: EAEYKRTCRS WGFENLEIDS RRNINSSKNA TMATTFNKII ENVTLELFPL HPEGR
001: MKVHEFSNGF SSSWDQHDST SSLSLSCKRL RPLAPKLSGS PPSPPSSSSG VTSATFDLKN FIRPDQTGPT KFEHKRDPPH QLETHPGGTR WNPTQEQIGI
101: LEMLYKGGMR TPNAQQIEHI TLQLGKYGKI EGKNVFYWFQ NHKARERQKQ KRNNLISLSC QSSFTTTGVF NPSVTMKTRT SSSLDIMREP MVEKEELVEE
201: NEYKRTCRSW GFENLEIENR RNKNSSTMAT TFNKIIDNVT LELFPLHPEG R
101: LEMLYKGGMR TPNAQQIEHI TLQLGKYGKI EGKNVFYWFQ NHKARERQKQ KRNNLISLSC QSSFTTTGVF NPSVTMKTRT SSSLDIMREP MVEKEELVEE
201: NEYKRTCRSW GFENLEIENR RNKNSSTMAT TFNKIIDNVT LELFPLHPEG R
Arabidopsis Description
WOX4WUSCHEL-related homeobox 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7J9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.