Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70975 | Canola | nucleus | 59.18 | 95.18 |
| Bra017448.1-P | Field mustard | nucleus | 90.64 | 87.68 |
| AT2G01500.1 | Thale cress | nucleus | 68.54 | 67.53 |
| CDY71075 | Canola | nucleus | 14.23 | 31.41 |
| CDX81686 | Canola | nucleus | 34.08 | 31.38 |
| CDY33728 | Canola | nucleus | 31.84 | 30.91 |
| CDY02582 | Canola | nucleus | 13.48 | 29.75 |
| CDY08539 | Canola | nucleus | 19.48 | 27.23 |
| CDY01007 | Canola | nucleus | 19.48 | 27.23 |
| CDX98862 | Canola | nucleus | 18.73 | 26.04 |
| CDY04966 | Canola | nucleus | 18.35 | 25.65 |
| CDX75955 | Canola | nucleus | 32.96 | 25.14 |
| CDY14103 | Canola | nucleus | 17.98 | 25.13 |
| CDX70130 | Canola | nucleus | 17.98 | 25.0 |
| CDY51928 | Canola | nucleus | 32.58 | 24.65 |
| CDY66658 | Canola | nucleus | 32.21 | 24.5 |
| CDX92182 | Canola | nucleus | 31.46 | 23.93 |
| CDX95764 | Canola | nucleus | 19.48 | 23.42 |
| CDX83299 | Canola | nucleus | 19.1 | 22.57 |
| CDY31716 | Canola | nucleus | 19.1 | 21.79 |
| CDX77191 | Canola | nucleus | 19.1 | 21.61 |
| CDY40847 | Canola | nucleus | 20.22 | 21.18 |
| CDY43848 | Canola | nucleus | 19.85 | 21.12 |
| CDY25659 | Canola | nucleus | 19.85 | 21.12 |
| CDY17046 | Canola | nucleus | 19.85 | 20.7 |
| CDY32648 | Canola | nucleus | 13.48 | 20.57 |
| CDX80277 | Canola | nucleus | 15.73 | 20.0 |
| CDY33030 | Canola | nucleus | 15.73 | 20.0 |
| CDY01358 | Canola | nucleus | 9.74 | 19.55 |
| CDY02885 | Canola | nucleus | 13.86 | 18.59 |
| CDY29212 | Canola | nucleus | 18.35 | 16.67 |
| CDY47803 | Canola | nucleus | 18.73 | 16.56 |
| CDY38144 | Canola | nucleus | 18.73 | 16.56 |
| CDY41648 | Canola | nucleus | 10.49 | 16.37 |
| CDY55370 | Canola | nucleus | 18.35 | 16.23 |
| CDY30337 | Canola | nucleus | 18.73 | 15.82 |
| CDY72488 | Canola | nucleus, plastid | 14.23 | 15.38 |
| CDX75511 | Canola | nucleus | 14.23 | 14.84 |
| CDY29511 | Canola | nucleus | 11.24 | 14.78 |
| CDY31870 | Canola | nucleus | 10.49 | 14.36 |
| CDX93197 | Canola | nucleus | 10.49 | 14.36 |
| CDY65899 | Canola | nucleus | 11.24 | 14.35 |
| CDX87744 | Canola | nucleus | 16.85 | 14.06 |
| CDX69148 | Canola | nucleus | 13.86 | 13.96 |
| CDY48780 | Canola | nucleus | 16.48 | 13.75 |
| CDY24814 | Canola | nucleus | 11.98 | 13.39 |
| CDY29949 | Canola | nucleus | 14.23 | 13.15 |
| CDY21173 | Canola | nucleus | 14.23 | 13.15 |
| CDX72546 | Canola | nucleus | 12.73 | 13.03 |
| CDY40623 | Canola | nucleus | 12.73 | 12.93 |
| CDY38461 | Canola | nucleus | 12.73 | 12.41 |
| CDY02686 | Canola | nucleus | 13.11 | 12.37 |
| CDY16883 | Canola | nucleus | 12.73 | 12.32 |
| CDY66087 | Canola | nucleus | 12.73 | 12.14 |
| CDY51756 | Canola | plastid | 14.61 | 11.96 |
| CDY50656 | Canola | nucleus | 14.61 | 11.5 |
| CDX79549 | Canola | nucleus | 15.73 | 10.58 |
| CDY69228 | Canola | nucleus | 15.36 | 10.51 |
| CDY17211 | Canola | nucleus | 15.36 | 10.51 |
| CDY29211 | Canola | mitochondrion | 3.0 | 5.37 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | GO:A0A078HTT1 | UniProt:A0A078HTT1 | EnsemblPlants:CDY41086 | ProteinID:CDY41086 |
| ProteinID:CDY41086.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00072408001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom |
| InterPro:IPR001356 | PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF509 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI0004EE5CC6 | SEG:seg | : | : | : |
Description
BnaA09g18650DBnaA09g18650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTT1]
Coordinates
chrLK032489:-:263892..265344
Molecular Weight (calculated)
30921.9 Da
IEP (calculated)
6.871
GRAVY (calculated)
-1.003
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MGYISNNNLI NYLAFSTTKP HLLSQCNIID NDHHQQLING SENNSAAAAS SRWNPTPEQI TALEEIYRRG TRTPTTEQIQ QIASKLSKYG RIEGKNVFYW
101: FQNHKSRERL KRRRCEGDND INSVHEPLKD VKDSSSGGYR VDQTKIYASF PHTNQQPQNE LVLPNLINNE DHCQTEESER ASDAGKEAMC GNLVASFVNQ
201: EPGEINIEED GYNVRGEKTR EIRTLNLFPV LENQEKTDWF AEKKKANANR MCYNYRYYYE FMPLKKN
101: FQNHKSRERL KRRRCEGDND INSVHEPLKD VKDSSSGGYR VDQTKIYASF PHTNQQPQNE LVLPNLINNE DHCQTEESER ASDAGKEAMC GNLVASFVNQ
201: EPGEINIEED GYNVRGEKTR EIRTLNLFPV LENQEKTDWF AEKKKANANR MCYNYRYYYE FMPLKKN
001: MGYISNNNLI NYLPLSTTQP PLLLTHCDIN GNDHHQLITA SSGEHDIDER KNNIPAAATL RWNPTPEQIT TLEELYRSGT RTPTTEQIQQ IASKLRKYGR
101: IEGKNVFYWF QNHKARERLK RRRREGGAII KPHKDVKDSS SGGHRVDQTK LCPSFPHTNR PQPQHELDPA SYNKDNNANN EDHGTTEESD QRASEVGKYA
201: TWRNLVTWSI TQQPEEINID ENVNGEEEET RDNRTLNLFP VREYQEKTGR LIEKTKACNY CYYYEFMPLK N
101: IEGKNVFYWF QNHKARERLK RRRREGGAII KPHKDVKDSS SGGHRVDQTK LCPSFPHTNR PQPQHELDPA SYNKDNNANN EDHGTTEESD QRASEVGKYA
201: TWRNLVTWSI TQQPEEINID ENVNGEEEET RDNRTLNLFP VREYQEKTGR LIEKTKACNY CYYYEFMPLK N
Arabidopsis Description
WOX6WUSCHEL-related homeobox 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.