Factsheet for AT2G01500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70975	Canola	nucleus	44.28	72.29
CDY41086	Canola	nucleus	67.53	68.54
Bra017448.1-P	Field mustard	nucleus	63.84	62.68
AT5G05770.1	Thale cress	nucleus	15.87	35.25
Bra026791.1-P	Field mustard	nucleus	33.21	34.75
CDY33728	Canola	nucleus	32.84	32.36
CDX81686	Canola	nucleus	33.95	31.72
AT3G11260.1	Thale cress	nucleus	18.82	28.02
AT3G18010.1	Thale cress	nucleus	33.95	26.29
AT2G28610.1	Thale cress	nucleus	21.03	23.36
AT5G59340.1	Thale cress	nucleus	21.77	22.69
AT1G46480.1	Thale cress	nucleus	19.56	21.12
AT2G17950.1	Thale cress	nucleus	21.4	19.86
AT1G20710.1	Thale cress	nucleus	11.07	15.23
AT1G20700.1	Thale cress	nucleus	11.07	14.22
AT5G45980.1	Thale cress	nucleus	16.61	13.85
AT4G35550.1	Thale cress	nucleus	13.65	13.81
AT5G17810.2	Thale cress	nucleus	13.28	13.43
AT2G33880.2	Thale cress	nucleus	15.87	11.08
AT3G03660.3	Thale cress	nucleus, plastid	13.28	11.04

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	EntrezGene:814678	UniProt:A0A178VTV0	ProteinID:AAC67326.2	ProteinID:AEC05461.1
ArrayExpress:AT2G01500	EnsemblPlantsGene:AT2G01500	RefSeq:AT2G01500	TAIR:AT2G01500	RefSeq:AT2G01500-TAIR-G	EnsemblPlants:AT2G01500.1
TAIR:AT2G01500.1	EMBL:AY085832	EMBL:AY251399	EMBL:AY885222	Unigene:At.42485	EMBL:DQ446451
GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653
GO:GO:0009790	GO:GO:0009791	GO:GO:0009908	GO:GO:0009965	GO:GO:0009987	GO:GO:0016043
GO:GO:0016049	GO:GO:0030154	GO:GO:0040007	GO:GO:0048314	GO:GO:0048353	GO:GO:0048366
GO:GO:0048437	GO:GO:0048446	GO:GO:0048482	GO:GO:0051301	GO:GO:0051510	InterPro:Homeobox-like_sf
InterPro:Homeobox_dom	InterPro:IPR001356	RefSeq:NP_565263.1	ProteinID:OAP08493.1	PFAM:PF00046	Symbol:PFS2
PO:PO:0000005	PO:PO:0000229	PO:PO:0009009	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009049	PO:PO:0009062	PO:PO:0009071	PO:PO:0020003	PO:PO:0020108
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF509	UniProt:Q1PFB2	UniProt:Q9ZVF5	SMART:SM00389
SUPFAM:SSF46689	UniParc:UPI00000A37E6	SEG:seg	:	:	:

Description

WOX6WUSCHEL-related homeobox 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVF5]

Coordinates

chr2:-:224156..226234

Molecular Weight (calculated)

31454.5 Da

IEP (calculated)

7.063

GRAVY (calculated)

-1.139

Length

271 amino acids

Sequence
(BLAST)

001: MGYISNNNLI NYLPLSTTQP PLLLTHCDIN GNDHHQLITA SSGEHDIDER KNNIPAAATL RWNPTPEQIT TLEELYRSGT RTPTTEQIQQ IASKLRKYGR
101: IEGKNVFYWF QNHKARERLK RRRREGGAII KPHKDVKDSS SGGHRVDQTK LCPSFPHTNR PQPQHELDPA SYNKDNNANN EDHGTTEESD QRASEVGKYA
201: TWRNLVTWSI TQQPEEINID ENVNGEEEET RDNRTLNLFP VREYQEKTGR LIEKTKACNY CYYYEFMPLK N

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.