Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G20700.1 | Thale cress | nucleus | 74.62 | 69.67 |
| CDY01358 | Canola | nucleus | 46.19 | 68.42 |
| Bra012245.1-P | Field mustard | nucleus | 46.19 | 68.42 |
| CDY31870 | Canola | nucleus | 64.97 | 65.64 |
| CDX93197 | Canola | nucleus | 64.97 | 65.64 |
| GSMUA_Achr4P25530_001 | Banana | nucleus | 43.15 | 40.28 |
| HORVU3Hr1G080690.1 | Barley | nucleus | 25.89 | 39.23 |
| AT4G35550.1 | Thale cress | nucleus | 47.72 | 35.07 |
| TraesCSU01G204800.1 | Wheat | nucleus | 26.9 | 33.97 |
| TraesCS3D01G335500.1 | Wheat | nucleus | 42.13 | 31.56 |
| TraesCS3B01G373800.1 | Wheat | nucleus | 41.62 | 31.42 |
| HORVU3Hr1G080660.5 | Barley | nucleus | 42.64 | 31.34 |
| TraesCS3A01G341700.1 | Wheat | nucleus | 41.62 | 30.94 |
| Os01t0818400-01 | Rice | nucleus | 41.62 | 30.71 |
| Zm00001d043076_P001 | Maize | nucleus | 42.13 | 30.4 |
| EES01660 | Sorghum | nucleus | 42.13 | 29.86 |
| GSMUA_Achr10P... | Banana | nucleus | 41.12 | 29.67 |
| Zm00001d012516_P001 | Maize | nucleus | 40.1 | 28.01 |
| AT5G05770.1 | Thale cress | nucleus | 14.21 | 22.95 |
| AT3G11260.1 | Thale cress | nucleus | 15.23 | 16.48 |
| AT1G46480.1 | Thale cress | nucleus | 19.8 | 15.54 |
| AT2G28610.1 | Thale cress | nucleus | 16.75 | 13.52 |
| AT5G59340.1 | Thale cress | nucleus | 17.26 | 13.08 |
| AT5G17810.2 | Thale cress | nucleus | 16.75 | 12.31 |
| AT2G01500.1 | Thale cress | nucleus | 15.23 | 11.07 |
| AT2G17950.1 | Thale cress | nucleus | 16.24 | 10.96 |
| AT2G33880.2 | Thale cress | nucleus | 21.32 | 10.82 |
| AT5G45980.1 | Thale cress | nucleus | 16.75 | 10.15 |
| AT3G03660.3 | Thale cress | nucleus, plastid | 16.75 | 10.12 |
| AT3G18010.1 | Thale cress | nucleus | 16.75 | 9.43 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | EntrezGene:838661 | ProteinID:AAF80617.1 | ProteinID:AEE30013.1 | ArrayExpress:AT1G20710 |
| EnsemblPlantsGene:AT1G20710 | RefSeq:AT1G20710 | TAIR:AT1G20710 | RefSeq:AT1G20710-TAIR-G | EnsemblPlants:AT1G20710.1 | TAIR:AT1G20710.1 |
| Unigene:At.51695 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | RefSeq:NP_173494.1 | PFAM:PF00046 | PFscan:PS50071 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF340 | UniProt:Q9LM83 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI00000A2BD2 |
| Symbol:WOX10 | : | : | : | : | : |
Description
WOX10Putative WUSCHEL-related homeobox 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM83]
Coordinates
chr1:+:7184485..7185267
Molecular Weight (calculated)
22401.4 Da
IEP (calculated)
6.245
GRAVY (calculated)
-0.698
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQESLNGRY GSRVMTDEQM ETLRKQIAIY AVLCDQLVFL HNSLSSVPLL SSGMNPMRGE YFDPMVASSS AHGMSTRPRW TPTTTQLQIL ENIYKEGSGT
101: PNPRRIKEIT MELSEHGQIM EKNVYHWFQN RRARSKRKQP PTTTITSSQA DDAAVTTTEE RGRCGDDSGG FESYEHILFP SPDLGIEHLL NRDKFID
101: PNPRRIKEIT MELSEHGQIM EKNVYHWFQN RRARSKRKQP PTTTITSSQA DDAAVTTTEE RGRCGDDSGG FESYEHILFP SPDLGIEHLL NRDKFID
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.