Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31870 | Canola | nucleus | 99.49 | 99.49 |
| CDY01358 | Canola | nucleus | 59.49 | 87.22 |
| AT1G20710.1 | Thale cress | nucleus | 65.64 | 64.97 |
| CDY29511 | Canola | nucleus | 66.67 | 64.04 |
| CDY65899 | Canola | nucleus | 67.69 | 63.16 |
| CDY41648 | Canola | nucleus | 36.41 | 41.52 |
| HORVU3Hr1G080690.1 | Barley | nucleus | 26.67 | 40.0 |
| GSMUA_Achr4P25530_001 | Banana | nucleus | 42.05 | 38.86 |
| TraesCSU01G204800.1 | Wheat | nucleus | 26.67 | 33.33 |
| CDY24814 | Canola | nucleus | 39.49 | 32.22 |
| CDX75511 | Canola | nucleus | 41.54 | 31.64 |
| CDX72546 | Canola | nucleus | 42.05 | 31.42 |
| CDX69148 | Canola | nucleus | 42.56 | 31.32 |
| CDY40623 | Canola | nucleus | 41.54 | 30.8 |
| TraesCS3D01G335500.1 | Wheat | nucleus | 41.03 | 30.42 |
| TraesCS3B01G373800.1 | Wheat | nucleus | 40.51 | 30.27 |
| HORVU3Hr1G080660.5 | Barley | nucleus | 41.54 | 30.22 |
| Os01t0818400-01 | Rice | nucleus | 41.03 | 29.96 |
| TraesCS3A01G341700.1 | Wheat | nucleus | 40.51 | 29.81 |
| Zm00001d043076_P001 | Maize | nucleus | 40.51 | 28.94 |
| Zm00001d012516_P001 | Maize | nucleus | 41.54 | 28.72 |
| EES01660 | Sorghum | nucleus | 40.51 | 28.42 |
| GSMUA_Achr10P... | Banana | nucleus | 38.97 | 27.84 |
| CDY71075 | Canola | nucleus | 11.79 | 19.01 |
| CDY02582 | Canola | nucleus | 10.77 | 17.36 |
| CDY08539 | Canola | nucleus | 16.92 | 17.28 |
| CDY01007 | Canola | nucleus | 16.92 | 17.28 |
| CDY70975 | Canola | nucleus | 14.36 | 16.87 |
| CDY04966 | Canola | nucleus | 15.9 | 16.23 |
| CDY14103 | Canola | nucleus | 15.9 | 16.23 |
| CDY72488 | Canola | nucleus, plastid | 20.51 | 16.19 |
| CDX98862 | Canola | nucleus | 15.38 | 15.62 |
| CDX70130 | Canola | nucleus | 14.87 | 15.1 |
| CDY43848 | Canola | nucleus | 18.97 | 14.74 |
| CDY21173 | Canola | nucleus | 21.54 | 14.53 |
| CDY29949 | Canola | nucleus | 21.54 | 14.53 |
| CDY40847 | Canola | nucleus | 18.46 | 14.12 |
| CDY17046 | Canola | nucleus | 18.46 | 14.06 |
| CDX95764 | Canola | nucleus | 15.9 | 13.96 |
| CDY25659 | Canola | nucleus | 17.95 | 13.94 |
| CDY38461 | Canola | nucleus | 19.49 | 13.87 |
| CDY16883 | Canola | nucleus | 19.49 | 13.77 |
| CDX83299 | Canola | nucleus | 15.9 | 13.72 |
| CDY31716 | Canola | nucleus | 16.41 | 13.68 |
| CDY66087 | Canola | nucleus | 19.49 | 13.57 |
| CDX77191 | Canola | nucleus | 15.9 | 13.14 |
| CDY02686 | Canola | nucleus | 18.97 | 13.07 |
| CDY51756 | Canola | plastid | 20.51 | 12.27 |
| CDY50656 | Canola | nucleus | 21.03 | 12.09 |
| CDY48780 | Canola | nucleus | 17.44 | 10.62 |
| CDX87744 | Canola | nucleus | 17.44 | 10.62 |
| CDY33728 | Canola | nucleus | 14.87 | 10.55 |
| CDY29212 | Canola | nucleus | 15.9 | 10.54 |
| CDY41086 | Canola | nucleus | 14.36 | 10.49 |
| CDY32648 | Canola | nucleus | 9.23 | 10.29 |
| CDY47803 | Canola | nucleus | 15.9 | 10.26 |
| CDY69228 | Canola | nucleus | 20.51 | 10.26 |
| CDY17211 | Canola | nucleus | 20.51 | 10.26 |
| CDX80277 | Canola | nucleus | 10.77 | 10.0 |
| CDY33030 | Canola | nucleus | 10.77 | 10.0 |
| CDX81686 | Canola | nucleus | 14.87 | 10.0 |
| CDY55370 | Canola | nucleus | 15.38 | 9.93 |
| CDY38144 | Canola | nucleus | 15.38 | 9.93 |
| CDX79549 | Canola | nucleus | 20.0 | 9.82 |
| CDY66658 | Canola | nucleus | 17.44 | 9.69 |
| CDX92182 | Canola | nucleus | 17.44 | 9.69 |
| CDY51928 | Canola | nucleus | 17.44 | 9.63 |
| CDY02885 | Canola | nucleus | 9.74 | 9.55 |
| CDY30337 | Canola | nucleus | 15.38 | 9.49 |
| CDX75955 | Canola | nucleus | 16.92 | 9.43 |
| CDY29211 | Canola | mitochondrion | 1.54 | 2.01 |
Protein Annotations
| EnsemblPlants:CDX93197 | EnsemblPlantsGene:GSBRNA2T00155138001 | Gene3D:1.10.10.60 | GO:A0A078DW92 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF340 | PFAM:PF00046 | PFscan:PS50071 | ProteinID:CDX93197 | ProteinID:CDX93197.1 | SEG:seg |
| SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI0004EDECF8 | MapMan:15.5.3.6 | : | : |
Description
BnaC04g46990D
Coordinates
chrLK031875:+:238452..239640
Molecular Weight (calculated)
21786.5 Da
IEP (calculated)
5.597
GRAVY (calculated)
-0.609
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGGSQNGAY DGRVMTEEQM EILSKQIAIY AAICRQLVSL HESLSSKLPL SSGVDPTGGG YFDSMGASPS TYKISHRHRW TPTSMQLQIL ESIYEEGSGT
101: PKPQRIEEIT LELSQHGQVM DKNVYNWFQN RRARSKRKQP QAMTTTTVQT VDAVAATEER SYGDSGGFES YDHILFPSTD FGIEHLLDGG IFRER
101: PKPQRIEEIT LELSQHGQVM DKNVYNWFQN RRARSKRKQP QAMTTTTVQT VDAVAATEER SYGDSGGFES YDHILFPSTD FGIEHLLDGG IFRER
001: MVKKKKEKEK SKEIEEMDRE IQNGAYSGRV MTEEQMEILR KQIAVYAVIC DQLVLLHNSL SSYHPLSSGV RPMVGGYFDP MGASSSSHRI STRHRWTPTS
101: TQLQILESIY DEGSGTPNRR RIREIATELS EHGQITETNV YNWFQNRRAR SKRKQPQTTT ANGQADDVAV TTEERRSCGD SGGLESYEHI LFPSPDLGIE
201: HLLSIGKFME T
101: TQLQILESIY DEGSGTPNRR RIREIATELS EHGQITETNV YNWFQNRRAR SKRKQPQTTT ANGQADDVAV TTEERRSCGD SGGLESYEHI LFPSPDLGIE
201: HLLSIGKFME T
Arabidopsis Description
WOX14WUSCHEL-related homeobox 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.