Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034855.1-P | Field mustard | mitochondrion | 72.77 | 97.2 |
| CDY01007 | Canola | nucleus | 96.34 | 96.34 |
| AT3G11260.1 | Thale cress | nucleus | 80.63 | 84.62 |
| CDY14103 | Canola | nucleus | 69.11 | 69.11 |
| CDX98862 | Canola | nucleus | 69.11 | 68.75 |
| CDY04966 | Canola | nucleus | 68.59 | 68.59 |
| CDX70130 | Canola | nucleus | 68.59 | 68.23 |
| PGSC0003DMT400053435 | Potato | nucleus | 52.88 | 64.33 |
| Solyc03g096300.2.1 | Tomato | nucleus | 52.88 | 63.92 |
| KRH73152 | Soybean | nucleus | 56.02 | 60.45 |
| KRG97769 | Soybean | nucleus | 52.88 | 58.05 |
| KRH31116 | Soybean | nucleus | 53.4 | 56.67 |
| VIT_13s0019g03460.t01 | Wine grape | nucleus | 39.79 | 53.9 |
| GSMUA_Achr7P14860_001 | Banana | nucleus | 43.46 | 43.68 |
| Os01t0854500-01 | Rice | nucleus | 45.55 | 43.5 |
| OQU87881 | Sorghum | nucleus | 47.12 | 41.28 |
| Zm00001d042821_P001 | Maize | nucleus | 46.07 | 39.82 |
| TraesCS3B01G399800.1 | Wheat | nucleus | 42.41 | 38.76 |
| TraesCS3D01G361100.1 | Wheat | nucleus | 42.41 | 38.57 |
| HORVU3Hr1G085050.3 | Barley | nucleus | 42.41 | 38.57 |
| TraesCS3A01G368100.1 | Wheat | nucleus | 42.41 | 38.21 |
| Zm00001d012330_P001 | Maize | nucleus | 45.03 | 36.6 |
| CDY02582 | Canola | nucleus | 17.8 | 28.1 |
| CDY70975 | Canola | nucleus | 23.04 | 26.51 |
| CDY71075 | Canola | nucleus | 15.18 | 23.97 |
| CDX95764 | Canola | nucleus | 24.61 | 21.17 |
| CDX83299 | Canola | nucleus | 24.61 | 20.8 |
| CDY31716 | Canola | nucleus | 25.13 | 20.51 |
| CDX77191 | Canola | nucleus | 25.13 | 20.34 |
| CDY01358 | Canola | nucleus | 13.61 | 19.55 |
| CDY41086 | Canola | nucleus | 27.23 | 19.48 |
| CDY43848 | Canola | nucleus | 25.13 | 19.12 |
| CDY40847 | Canola | nucleus | 24.61 | 18.43 |
| CDY25659 | Canola | nucleus | 24.08 | 18.33 |
| CDY55370 | Canola | nucleus | 28.8 | 18.21 |
| CDY38144 | Canola | nucleus | 28.8 | 18.21 |
| CDY33728 | Canola | nucleus | 26.18 | 18.18 |
| CDY29212 | Canola | nucleus | 27.75 | 18.03 |
| CDY17046 | Canola | nucleus | 24.08 | 17.97 |
| CDX81686 | Canola | nucleus | 27.23 | 17.93 |
| CDY47803 | Canola | nucleus | 28.27 | 17.88 |
| CDY30337 | Canola | nucleus | 28.27 | 17.09 |
| CDY31870 | Canola | nucleus | 17.28 | 16.92 |
| CDX93197 | Canola | nucleus | 17.28 | 16.92 |
| CDX75955 | Canola | nucleus | 30.89 | 16.86 |
| CDY51928 | Canola | nucleus | 30.89 | 16.71 |
| CDY33030 | Canola | nucleus | 18.32 | 16.67 |
| CDX80277 | Canola | nucleus | 18.32 | 16.67 |
| CDY41648 | Canola | nucleus | 14.66 | 16.37 |
| CDY66658 | Canola | nucleus | 29.84 | 16.24 |
| CDX92182 | Canola | nucleus | 29.84 | 16.24 |
| CDY32648 | Canola | nucleus | 14.66 | 16.0 |
| CDY65899 | Canola | nucleus | 16.75 | 15.31 |
| CDY29511 | Canola | nucleus | 16.23 | 15.27 |
| CDY02885 | Canola | nucleus | 15.71 | 15.08 |
| CDX75511 | Canola | nucleus | 18.32 | 13.67 |
| CDY24814 | Canola | nucleus | 16.75 | 13.39 |
| CDY40623 | Canola | nucleus | 18.32 | 13.31 |
| CDX72546 | Canola | nucleus | 17.8 | 13.03 |
| CDX69148 | Canola | nucleus | 17.8 | 12.83 |
| CDX87744 | Canola | nucleus | 19.9 | 11.88 |
| CDY48780 | Canola | nucleus | 19.9 | 11.88 |
| CDY72488 | Canola | nucleus, plastid | 14.14 | 10.93 |
| CDY66087 | Canola | nucleus | 15.71 | 10.71 |
| CDY02686 | Canola | nucleus | 15.71 | 10.6 |
| CDY38461 | Canola | nucleus | 15.18 | 10.58 |
| CDY17211 | Canola | nucleus | 21.47 | 10.51 |
| CDY69228 | Canola | nucleus | 21.47 | 10.51 |
| CDY16883 | Canola | nucleus | 15.18 | 10.51 |
| CDX79549 | Canola | nucleus | 21.47 | 10.33 |
| CDY29211 | Canola | mitochondrion | 7.85 | 10.07 |
| CDY21173 | Canola | nucleus | 14.66 | 9.69 |
| CDY29949 | Canola | nucleus | 14.66 | 9.69 |
| CDY51756 | Canola | plastid | 15.71 | 9.2 |
| CDY50656 | Canola | nucleus | 15.18 | 8.55 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.6 | GO:A0A078F680 | UniProt:A0A078F680 | EnsemblPlants:CDY08539 | ProteinID:CDY08539 |
| ProteinID:CDY08539.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00000320001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom |
| InterPro:IPR001356 | PFAM:PF00046 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF149 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI0004EE6274 | SEG:seg | : | : | : |
Description
BnaA05g27750DBnaA05g27750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F680]
Coordinates
chrLK031986:-:631890..632767
Molecular Weight (calculated)
22362.2 Da
IEP (calculated)
9.064
GRAVY (calculated)
-0.958
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFPLKVRSV RGNNGGGGGG TGTKCGRWNP TVEQLKVLSD LFRAGLRTPT TDQIQKISTE LSFYGKIESK NVFYWFQNHK ARERQKRRKI STDFDHHHQE
101: NDYISHHHHR QPSTRDVLEI NEDEEERVIE TLQLFPVNSF QESKVEKMRS RVNNQYREYI RETNTTTFLS YSSCGAEMEH PSPLELRLSF L
101: NDYISHHHHR QPSTRDVLEI NEDEEERVIE TLQLFPVNSF QESKVEKMRS RVNNQYREYI RETNTTTFLS YSSCGAEMEH PSPLELRLSF L
001: MSFSVKGRSL RGNNNGGTGT KCGRWNPTVE QLKILTDLFR AGLRTPTTDQ IQKISTELSF YGKIESKNVF YWFQNHKARE RQKRRKISID FDHHHHQPST
101: RDVFEISEED CQEEEKVIET LQLFPVNSFE DSNSKVDKMR ARGNNQYREY IRETTTTSFS PYSSCGAEME HPPPLDLRLS FL
101: RDVFEISEED CQEEEKVIET LQLFPVNSFE DSNSKVDKMR ARGNNQYREY IRETTTTSFS PYSSCGAEME HPPPLDLRLS FL
Arabidopsis Description
WOX5WUSCHEL-related homeobox 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.