Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25659 | Canola | nucleus | 99.17 | 47.81 |
| Bra032212.1-P | Field mustard | nucleus | 97.52 | 47.01 |
| CDY43848 | Canola | nucleus | 97.52 | 47.01 |
| AT1G46480.1 | Thale cress | nucleus | 84.3 | 40.64 |
| CDY17046 | Canola | nucleus | 85.95 | 40.62 |
| CDY40847 | Canola | nucleus | 84.3 | 40.0 |
| VIT_18s0001g10160.t01 | Wine grape | nucleus | 55.37 | 31.75 |
| KRH15387 | Soybean | nucleus | 53.72 | 28.14 |
| KRH61328 | Soybean | nucleus | 52.07 | 28.12 |
| KRH52024 | Soybean | nucleus | 52.89 | 27.83 |
| KRH05655 | Soybean | nucleus | 53.72 | 26.64 |
| PGSC0003DMT400020662 | Potato | nucleus | 52.07 | 26.14 |
| Solyc04g078650.2.1 | Tomato | nucleus, plastid | 52.07 | 26.03 |
| CDY14103 | Canola | nucleus | 30.58 | 19.37 |
| CDX70130 | Canola | nucleus | 30.58 | 19.27 |
| CDX98862 | Canola | nucleus | 30.58 | 19.27 |
| CDX95764 | Canola | nucleus | 34.71 | 18.92 |
| CDY04966 | Canola | nucleus | 29.75 | 18.85 |
| CDY70975 | Canola | nucleus | 25.62 | 18.67 |
| CDX83299 | Canola | nucleus | 34.71 | 18.58 |
| CDY01007 | Canola | nucleus | 28.1 | 17.8 |
| CDY08539 | Canola | nucleus | 28.1 | 17.8 |
| CDY31716 | Canola | nucleus | 33.88 | 17.52 |
| CDX77191 | Canola | nucleus | 33.88 | 17.37 |
| CDY71075 | Canola | nucleus | 16.53 | 16.53 |
| CDY41086 | Canola | nucleus | 29.75 | 13.48 |
| CDY29212 | Canola | nucleus | 32.23 | 13.27 |
| CDY47803 | Canola | nucleus | 31.41 | 12.58 |
| CDY55370 | Canola | nucleus | 31.41 | 12.58 |
| CDX75955 | Canola | nucleus | 36.36 | 12.57 |
| CDY51928 | Canola | nucleus | 36.36 | 12.46 |
| CDX81686 | Canola | nucleus | 29.75 | 12.41 |
| CDY30337 | Canola | nucleus | 32.23 | 12.34 |
| CDY38144 | Canola | nucleus | 30.58 | 12.25 |
| CDY33728 | Canola | nucleus | 27.27 | 12.0 |
| CDY66658 | Canola | nucleus | 34.71 | 11.97 |
| CDX92182 | Canola | nucleus | 34.71 | 11.97 |
| CDY31870 | Canola | nucleus | 17.36 | 10.77 |
| CDX93197 | Canola | nucleus | 17.36 | 10.77 |
| CDY33030 | Canola | nucleus | 18.18 | 10.48 |
| CDY29511 | Canola | nucleus | 17.36 | 10.34 |
| CDY65899 | Canola | nucleus | 17.36 | 10.05 |
| CDX80277 | Canola | nucleus | 17.36 | 10.0 |
| CDY41648 | Canola | nucleus | 14.05 | 9.94 |
| CDY01358 | Canola | nucleus | 10.74 | 9.77 |
| CDY32648 | Canola | nucleus | 13.22 | 9.14 |
| CDY72488 | Canola | nucleus, plastid | 17.36 | 8.5 |
| CDY02885 | Canola | nucleus | 13.22 | 8.04 |
| CDY24814 | Canola | nucleus | 15.7 | 7.95 |
| CDX87744 | Canola | nucleus | 20.66 | 7.81 |
| CDY48780 | Canola | nucleus | 20.66 | 7.81 |
| CDX75511 | Canola | nucleus | 16.53 | 7.81 |
| CDX72546 | Canola | nucleus | 16.53 | 7.66 |
| CDY40623 | Canola | nucleus | 16.53 | 7.6 |
| CDX69148 | Canola | nucleus | 16.53 | 7.55 |
| CDY29949 | Canola | nucleus | 16.53 | 6.92 |
| CDY21173 | Canola | nucleus | 16.53 | 6.92 |
| CDY51756 | Canola | plastid | 18.18 | 6.75 |
| CDY29211 | Canola | mitochondrion | 8.26 | 6.71 |
| CDY69228 | Canola | nucleus | 21.49 | 6.67 |
| CDY17211 | Canola | nucleus | 21.49 | 6.67 |
| CDX79549 | Canola | nucleus | 21.49 | 6.55 |
| CDY50656 | Canola | nucleus | 18.18 | 6.49 |
| CDY16883 | Canola | nucleus | 14.05 | 6.16 |
| CDY02686 | Canola | nucleus | 14.05 | 6.01 |
| CDY38461 | Canola | nucleus | 13.22 | 5.84 |
| CDY66087 | Canola | nucleus | 13.22 | 5.71 |
Protein Annotations
| EnsemblPlants:CDY02582 | EnsemblPlantsGene:GSBRNA2T00114682001 | GO:A0A078EN96 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF263 |
| PFAM:PF00046 | PFscan:PS50071 | ProteinID:CDY02582 | ProteinID:CDY02582.1 | SUPFAM:SSF46689 | UniParc:UPI0004EED627 |
| MapMan:15.5.3.6 | : | : | : | : | : |
Description
BnaC02g08530D
Coordinates
chrLK031936:+:82434..82949
Molecular Weight (calculated)
13978.3 Da
IEP (calculated)
8.731
GRAVY (calculated)
-0.872
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MRTPNAEQIE HVTSQLGEYG KIEGKNVFYW FQNHKARERQ KQKRNNLSLS CQGSLSTTSV SNASELLEEN EYKRTCRSWG FENLKIESRR NINSSINATI
101: ATTFNIDNVT LELFPLHPEG R
101: ATTFNIDNVT LELFPLHPEG R
001: MKVHEFSNGF SSSWDQHDST SSLSLSCKRL RPLAPKLSGS PPSPPSSSSG VTSATFDLKN FIRPDQTGPT KFEHKRDPPH QLETHPGGTR WNPTQEQIGI
101: LEMLYKGGMR TPNAQQIEHI TLQLGKYGKI EGKNVFYWFQ NHKARERQKQ KRNNLISLSC QSSFTTTGVF NPSVTMKTRT SSSLDIMREP MVEKEELVEE
201: NEYKRTCRSW GFENLEIENR RNKNSSTMAT TFNKIIDNVT LELFPLHPEG R
101: LEMLYKGGMR TPNAQQIEHI TLQLGKYGKI EGKNVFYWFQ NHKARERQKQ KRNNLISLSC QSSFTTTGVF NPSVTMKTRT SSSLDIMREP MVEKEELVEE
201: NEYKRTCRSW GFENLEIENR RNKNSSTMAT TFNKIIDNVT LELFPLHPEG R
Arabidopsis Description
WOX4WUSCHEL-related homeobox 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7J9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.