Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32648 | Canola | nucleus | 83.92 | 95.43 |
| CDY33030 | Canola | nucleus | 78.89 | 74.76 |
| CDX80277 | Canola | nucleus | 78.89 | 74.76 |
| AT5G59340.1 | Thale cress | nucleus | 75.88 | 58.08 |
| KRH23053 | Soybean | nucleus | 28.14 | 26.42 |
| KRH10279 | Soybean | nucleus | 27.14 | 24.66 |
| Solyc06g076000.1.1 | Tomato | nucleus | 28.64 | 23.75 |
| PGSC0003DMT400077947 | Potato | nucleus | 28.14 | 23.73 |
| GSMUA_Achr10P... | Banana | nucleus | 25.63 | 21.89 |
| KRH29810 | Soybean | nucleus | 27.64 | 21.07 |
| KRH24809 | Soybean | nucleus | 29.65 | 18.04 |
| CDX95764 | Canola | nucleus | 20.1 | 18.02 |
| CDY70975 | Canola | nucleus | 14.57 | 17.47 |
| CDY71075 | Canola | nucleus | 10.55 | 17.36 |
| CDY04966 | Canola | nucleus | 16.58 | 17.28 |
| CDY14103 | Canola | nucleus | 16.58 | 17.28 |
| CDX83299 | Canola | nucleus | 19.6 | 17.26 |
| CDX98862 | Canola | nucleus | 16.08 | 16.67 |
| CDX70130 | Canola | nucleus | 16.08 | 16.67 |
| CDY08539 | Canola | nucleus | 15.08 | 15.71 |
| CDY01007 | Canola | nucleus | 15.08 | 15.71 |
| CDX77191 | Canola | nucleus | 18.09 | 15.25 |
| CDY31716 | Canola | nucleus | 17.59 | 14.96 |
| CDY41086 | Canola | nucleus | 18.59 | 13.86 |
| CDY02582 | Canola | nucleus | 8.04 | 13.22 |
| CDY40847 | Canola | nucleus | 16.58 | 12.94 |
| CDY17046 | Canola | nucleus | 16.58 | 12.89 |
| CDY43848 | Canola | nucleus | 16.08 | 12.75 |
| CDY25659 | Canola | nucleus | 15.58 | 12.35 |
| CDY33728 | Canola | nucleus | 16.08 | 11.64 |
| CDY01358 | Canola | nucleus | 7.54 | 11.28 |
| CDY55370 | Canola | nucleus | 16.58 | 10.93 |
| CDY38144 | Canola | nucleus | 16.58 | 10.93 |
| CDY29212 | Canola | nucleus | 16.08 | 10.88 |
| CDX75955 | Canola | nucleus | 19.1 | 10.86 |
| CDX92182 | Canola | nucleus | 19.1 | 10.83 |
| CDY51928 | Canola | nucleus | 19.1 | 10.76 |
| CDY66658 | Canola | nucleus | 18.59 | 10.54 |
| CDX81686 | Canola | nucleus | 15.08 | 10.34 |
| CDY47803 | Canola | nucleus | 15.58 | 10.26 |
| CDY30337 | Canola | nucleus | 15.58 | 9.81 |
| CDY31870 | Canola | nucleus | 9.55 | 9.74 |
| CDX93197 | Canola | nucleus | 9.55 | 9.74 |
| CDY41648 | Canola | nucleus | 7.54 | 8.77 |
| CDY48780 | Canola | nucleus | 14.07 | 8.75 |
| CDX87744 | Canola | nucleus | 14.07 | 8.75 |
| CDY16883 | Canola | nucleus | 12.06 | 8.7 |
| CDY29949 | Canola | nucleus | 12.56 | 8.65 |
| CDY21173 | Canola | nucleus | 12.56 | 8.65 |
| CDY72488 | Canola | nucleus, plastid | 10.55 | 8.5 |
| CDY02686 | Canola | nucleus | 12.06 | 8.48 |
| CDY38461 | Canola | nucleus | 11.56 | 8.39 |
| CDY29511 | Canola | nucleus | 8.54 | 8.37 |
| CDY24814 | Canola | nucleus | 10.05 | 8.37 |
| CDX69148 | Canola | nucleus | 11.06 | 8.3 |
| CDY66087 | Canola | nucleus | 11.56 | 8.21 |
| CDX75511 | Canola | nucleus | 10.55 | 8.2 |
| CDY65899 | Canola | nucleus | 8.54 | 8.13 |
| CDY29211 | Canola | mitochondrion | 6.03 | 8.05 |
| CDX72546 | Canola | nucleus | 10.55 | 8.05 |
| CDY40623 | Canola | nucleus | 10.55 | 7.98 |
| CDY51756 | Canola | plastid | 12.06 | 7.36 |
| CDY50656 | Canola | nucleus | 12.06 | 7.08 |
| CDX79549 | Canola | nucleus | 13.57 | 6.8 |
| CDY69228 | Canola | nucleus | 12.56 | 6.41 |
| CDY17211 | Canola | nucleus | 12.06 | 6.15 |
Protein Annotations
| EnsemblPlants:CDY02885 | EnsemblPlantsGene:GSBRNA2T00115106001 | GO:A0A078ELI7 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox_dom | InterPro:IPR001356 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF203 | PFAM:PF00046 |
| ProteinID:CDY02885 | ProteinID:CDY02885.1 | SEG:seg | UniParc:UPI0004EF35D7 | MapMan:35.1 | : |
Description
BnaC02g10040D
Coordinates
chrLK031937:-:1133348..1134391
Molecular Weight (calculated)
21672.9 Da
IEP (calculated)
6.394
GRAVY (calculated)
-0.774
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKEGKAGTA SSSRWNPTKE QITLLENLYK EGIRTPSADQ IQQITVGCVS PYYLQQVGDH HNQHGHGSVY RHSNNVMNPS GGYDKRTITD HKTQLSDITT
101: TAARMSMSSS SLRFDRFALQ DHGYNGEDIN VNSNEPKTLP LFPLQPLDAA SEDGVGNSKF SPGRDSPVTS FGDGGGREQP FIDFFSGGSS RFANSANGL
101: TAARMSMSSS SLRFDRFALQ DHGYNGEDIN VNSNEPKTLP LFPLQPLDAA SEDGVGNSKF SPGRDSPVTS FGDGGGREQP FIDFFSGGSS RFANSANGL
001: MENEVNAGTA SSSRWNPTKD QITLLENLYK EGIRTPSADQ IQQITGRLRA YGHIEGKNVF YWFQNHKARQ RQKQKQERMA YFNRLLHKTS RFFYPPPCSN
101: VGCVSPYYLQ QASDHHMNQH GSVYTNDLLH RNNVMIPSGG YEKRTVTQHQ KQLSDIRTTA ATRMPISPSS LRFDRFALRD NCYAGEDINV NSSGRKTLPL
201: FPLQPLNASN ADGMGSSSFA LGSDSPVDCS SDGAGREQPF IDFFSGGSTS TRFDSNGNGL
101: VGCVSPYYLQ QASDHHMNQH GSVYTNDLLH RNNVMIPSGG YEKRTVTQHQ KQLSDIRTTA ATRMPISPSS LRFDRFALRD NCYAGEDINV NSSGRKTLPL
201: FPLQPLNASN ADGMGSSSFA LGSDSPVDCS SDGAGREQPF IDFFSGGSTS TRFDSNGNGL
Arabidopsis Description
WOX2WUSCHEL-related homeobox 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7K1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.