Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g072890.1.1 | Tomato | nucleus | 89.8 | 83.33 |
| VIT_08s0056g01200.t01 | Wine grape | nucleus | 58.37 | 60.59 |
| GSMUA_Achr10P... | Banana | nucleus | 48.57 | 48.77 |
| Bra036446.1-P | Field mustard | nucleus | 51.43 | 47.55 |
| Bra002108.1-P | Field mustard | nucleus | 52.24 | 46.89 |
| CDY16883 | Canola | nucleus | 52.65 | 46.74 |
| CDY38461 | Canola | nucleus | 52.24 | 46.72 |
| KRG94925 | Soybean | nucleus | 53.06 | 46.43 |
| Bra023638.1-P | Field mustard | nucleus | 51.84 | 46.18 |
| TraesCS2B01G117900.1 | Wheat | nucleus | 48.98 | 45.98 |
| AT5G17810.2 | Thale cress | nucleus | 50.2 | 45.9 |
| Zm00001d022524_P001 | Maize | nucleus | 48.16 | 45.56 |
| Os07t0684900-01 | Rice | nucleus | 48.57 | 45.42 |
| TraesCS2A01G100700.1 | Wheat | nucleus | 48.98 | 45.28 |
| TraesCS2D01G100200.1 | Wheat | nucleus | 48.57 | 45.08 |
| CDY66087 | Canola | nucleus | 51.02 | 44.64 |
| CDY29949 | Canola | nucleus | 52.65 | 44.64 |
| CDY21173 | Canola | nucleus | 52.65 | 44.64 |
| CDY02686 | Canola | nucleus | 51.43 | 44.52 |
| KRH64971 | Soybean | nucleus | 53.47 | 44.41 |
| AT3G03660.3 | Thale cress | nucleus, plastid | 55.92 | 42.02 |
| Bra031980.1-P | Field mustard | nucleus | 52.65 | 40.06 |
| TraesCS4D01G176400.1 | Wheat | nucleus | 49.39 | 39.54 |
| TraesCS4A01G130200.1 | Wheat | nucleus | 49.39 | 39.41 |
| CDY51756 | Canola | plastid | 52.24 | 39.26 |
| TraesCS4B01G174400.1 | Wheat | nucleus | 49.39 | 39.16 |
| GSMUA_Achr10P... | Banana | nucleus | 42.45 | 39.1 |
| TraesCS3B01G087800.1 | Wheat | nucleus | 41.63 | 39.08 |
| CDY50656 | Canola | nucleus | 53.88 | 38.94 |
| TraesCS3D01G073300.1 | Wheat | nucleus | 41.22 | 38.7 |
| TraesCS3A01G073500.1 | Wheat | nucleus | 40.82 | 38.46 |
| KXG24798 | Sorghum | nucleus | 43.27 | 38.41 |
| KXG39473 | Sorghum | nucleus | 48.98 | 38.22 |
| GSMUA_Achr3P09460_001 | Banana | nucleus | 49.8 | 38.12 |
| Zm00001d047559_P001 | Maize | nucleus | 48.98 | 38.1 |
| Os08t0242400-01 | Rice | nucleus | 44.08 | 38.03 |
| HORVU3Hr1G013290.3 | Barley | nucleus | 40.41 | 37.93 |
| Zm00001d028986_P001 | Maize | nucleus | 49.39 | 37.46 |
| GSMUA_Achr6P15910_001 | Banana | nucleus | 47.35 | 36.59 |
| CDY72488 | Canola | nucleus, plastid | 36.73 | 36.44 |
| GSMUA_Achr5P27730_001 | Banana | nucleus | 45.71 | 35.9 |
| OQU90491 | Sorghum | nucleus | 37.96 | 35.77 |
| HORVU3Hr1G013330.1 | Barley | nucleus | 27.76 | 35.05 |
| Zm00001d024410_P001 | Maize | nucleus | 41.63 | 34.69 |
| Os03t0325600-01 | Rice | nucleus | 47.76 | 32.87 |
| GSMUA_Achr9P05010_001 | Banana | nucleus, plastid | 48.57 | 32.78 |
| GSMUA_Achr8P01590_001 | Banana | nucleus | 47.76 | 27.86 |
| PGSC0003DMT400027850 | Potato | nucleus | 37.14 | 27.33 |
| HORVU4Hr1G051530.5 | Barley | nucleus | 38.37 | 27.25 |
| PGSC0003DMT400016896 | Potato | mitochondrion | 11.02 | 24.55 |
| PGSC0003DMT400053435 | Potato | nucleus | 12.65 | 19.75 |
| PGSC0003DMT400065247 | Potato | mitochondrion | 12.24 | 15.0 |
| PGSC0003DMT400003980 | Potato | nucleus | 16.73 | 14.91 |
| PGSC0003DMT400077947 | Potato | nucleus | 14.29 | 14.83 |
| PGSC0003DMT400009157 | Potato | nucleus | 16.33 | 13.94 |
| PGSC0003DMT400020662 | Potato | nucleus | 13.06 | 13.28 |
| PGSC0003DMT400014464 | Potato | nucleus | 16.73 | 10.49 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:102580730 | MapMan:15.5.3.6 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_dom | InterPro:IPR001356 | UniProt:M1CKL8 | PFAM:PF00046 | EnsemblPlantsGene:PGSC0003DMG400027030 | PGSC:PGSC0003DMG400027030 |
| EnsemblPlants:PGSC0003DMT400069529 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF185 | SMART:SM00389 | SUPFAM:SSF46689 |
| UniParc:UPI000295FB38 | RefSeq:XP_015164268.1 | SEG:seg | : | : | : |
Description
Homeobox domain containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400027030]
Coordinates
chr6:+:53547529..53550282
Molecular Weight (calculated)
26710.1 Da
IEP (calculated)
5.722
GRAVY (calculated)
-0.395
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDDSSSSNQ SCERNETVRS RWNPKPEQIV ILESIFNSGM VNPQKDETVR IRKMLEQFGA VGDANVFYWF QNRRSRSRRR QRQIQASLSA ASNSNEEQSA
101: RSSSSGAIQF QTNFVPSSVS SSLGGVVGNA NDGLFLFSGP MEIDQNSSIT SILCSPTDNS NLNCSSSGFI TVFINGVATQ VPRGPLDMKA MFGPEDLVLY
201: HSSGVPLPVN ENGFVVQGLQ HGESYFLVSS HQLPQVAGGR VSNMT
101: RSSSSGAIQF QTNFVPSSVS SSLGGVVGNA NDGLFLFSGP MEIDQNSSIT SILCSPTDNS NLNCSSSGFI TVFINGVATQ VPRGPLDMKA MFGPEDLVLY
201: HSSGVPLPVN ENGFVVQGLQ HGESYFLVSS HQLPQVAGGR VSNMT
001: MDQEQTPHSP TRHSRSPPSS ASGSTSAEPV RSRWSPKPEQ ILILESIFHS GMVNPPKEET VRIRKMLEKF GAVGDANVFY WFQNRRSRSR RRQRQLQAAA
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FASSSSSYGG GCDNQSNSGM ENLLTMSGQM SYHEATHHHY QNHSSNVTSI LCPSDQNSNF
201: QYQQGAITVF INGVPTEVTR GGIDMKATFG EDLVLVHSSG VPLPTDEFGF LMHSLQHGEA YFLVPRQT
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FASSSSSYGG GCDNQSNSGM ENLLTMSGQM SYHEATHHHY QNHSSNVTSI LCPSDQNSNF
201: QYQQGAITVF INGVPTEVTR GGIDMKATFG EDLVLVHSSG VPLPTDEFGF LMHSLQHGEA YFLVPRQT
Arabidopsis Description
WOX11WUSCHEL related homeobox 11 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LND8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.