Factsheet for Bra031980.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51756	Canola	plastid	93.17	92.02
Bra036446.1-P	Field mustard	nucleus	68.32	83.02
AT3G03660.3	Thale cress	nucleus, plastid	71.74	70.86
Bra002108.1-P	Field mustard	nucleus	54.04	63.74
Bra023638.1-P	Field mustard	nucleus	53.42	62.55
VIT_08s0056g01200.t01	Wine grape	nucleus	41.3	56.36
PGSC0003DMT400069529	Potato	nucleus	40.06	52.65
Solyc06g072890.1.1	Tomato	nucleus	40.68	49.62
KRG94925	Soybean	nucleus	42.86	49.29
GSMUA_Achr10P...	Banana	nucleus	37.27	49.18
KRH64971	Soybean	nucleus	43.48	47.46
Os07t0684900-01	Rice	nucleus	38.51	47.33
TraesCS2B01G117900.1	Wheat	nucleus	38.2	47.13
TraesCS2D01G100200.1	Wheat	nucleus	38.2	46.59
TraesCS2A01G100700.1	Wheat	nucleus	38.2	46.42
Zm00001d022524_P001	Maize	nucleus	37.27	46.33
TraesCS4B01G174400.1	Wheat	nucleus	40.68	42.39
TraesCS4A01G130200.1	Wheat	nucleus	40.37	42.35
TraesCS4D01G176400.1	Wheat	nucleus	40.06	42.16
Zm00001d047559_P001	Maize	nucleus	40.99	41.9
Os08t0242400-01	Rice	nucleus	36.65	41.55
KXG39473	Sorghum	nucleus	40.06	41.08
TraesCS3A01G073500.1	Wheat	nucleus	32.61	40.38
TraesCS3D01G073300.1	Wheat	nucleus	32.61	40.23
TraesCS3B01G087800.1	Wheat	nucleus	32.3	39.85
HORVU3Hr1G013290.3	Barley	nucleus	32.3	39.85
GSMUA_Achr3P09460_001	Banana	nucleus	39.44	39.69
Zm00001d028986_P001	Maize	nucleus	39.75	39.63
KXG24798	Sorghum	nucleus	33.85	39.49
OQU90491	Sorghum	nucleus	31.68	39.23
GSMUA_Achr10P...	Banana	nucleus	31.99	38.72
HORVU3Hr1G013330.1	Barley	nucleus	22.67	37.63
GSMUA_Achr6P15910_001	Banana	nucleus	36.02	36.59
GSMUA_Achr5P27730_001	Banana	nucleus	35.4	36.54
Os03t0325600-01	Rice	nucleus	39.44	35.67
Zm00001d024410_P001	Maize	nucleus	32.3	35.37
GSMUA_Achr9P05010_001	Banana	nucleus, plastid	36.34	32.23
HORVU4Hr1G051530.5	Barley	nucleus	33.23	31.01
GSMUA_Achr8P01590_001	Banana	nucleus	36.65	28.1
Bra022008.1-P	Field mustard	nucleus	25.16	26.3
Bra005464.1-P	Field mustard	nucleus	29.81	24.62
Bra022960.1-P	Field mustard	nucleus	29.5	24.17
Bra012245.1-P	Field mustard	nucleus	8.7	21.05
Bra025839.1-P	Field mustard	nucleus	11.49	18.23
Bra028749.1-P	Field mustard	nucleus	9.01	16.67
Bra009132.1-P	Field mustard	nucleus	9.01	15.1
Bra017448.1-P	Field mustard	nucleus	12.42	14.49
Bra032212.1-P	Field mustard	nucleus	11.18	14.34
Bra011623.1-P	Field mustard	nucleus	11.49	14.34
Bra017720.1-P	Field mustard	nucleus	11.8	14.34
Bra037245.1-P	Field mustard	nucleus	13.66	14.15
Bra010531.1-P	Field mustard	nucleus	10.25	13.98
Bra026791.1-P	Field mustard	nucleus	11.18	13.9
Bra034855.1-P	Field mustard	mitochondrion	5.9	13.29
Bra035688.1-P	Field mustard	nucleus	9.63	13.25
Bra039894.1-P	Field mustard	nucleus	12.42	13.24
Bra014055.1-P	Field mustard	nucleus	10.56	13.23
Bra024485.1-P	Field mustard	nucleus	11.8	12.93
Bra000484.1-P	Field mustard	nucleus	8.7	12.39
Bra020321.1-P	Field mustard	nucleus	7.45	12.06
Bra001694.1-P	Field mustard	nucleus	12.73	11.61
Bra002576.1-P	Field mustard	nucleus	7.45	11.43
Bra022267.1-P	Field mustard	nucleus	12.42	11.4

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	EnsemblPlantsGene:Bra031980	EnsemblPlants:Bra031980.1	EnsemblPlants:Bra031980.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0016020	GO:GO:0016021	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356
UniProt:M4ET50	PFAM:PF00046	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF185	SMART:SM00389
SUPFAM:SSF46689	TMHMM:TMhelix	UniParc:UPI0002546342	SEG:seg	:	:

Description

AT3G03660 (E=8e-103) WOX11 | WOX11 (WUSCHEL related homeobox 11); DNA binding / transcription factor

Coordinates

chrA02:-:26818151..26819737

Molecular Weight (calculated)

34957.0 Da

IEP (calculated)

6.792

GRAVY (calculated)

-0.249

Length

322 amino acids

Sequence
(BLAST)

001: MDQGQTPHST TGQSHSPSSS ASGSTSTEPV RSRWSPKPEQ ILILESIFNS GMVNPPKEET VRIRKMLEKF GKVGDANVFY WFQNRRSRSR RRQRQLQAAA
101: AAATTTTNTC DQTMMVSNNL PQHSGSDLGF GGCSTSNYLF ASSSSYGAGC DNHSNNGMEN LLTMSGEMGY HGANQHHYNY HSSNVESILC PSEQSSNYHY
201: QQGSIMVFIN GVPTEVTSGG IDMKVTFGED LVLVNSSGVP LPTDQFGFLM HSLQHGEAYF LVITLSLSLS LSLSLSLSLS LSLSLSLSLS LSLSLSLSLS
301: LSLFSLSLSL SLSPHFDVEN RK

Best Arabidopsis Sequence Match ( AT3G03660.4 )
(BLAST)

001: MDQEQTPHSP TRHSRSPPSS ASGSTSAEPV RSRWSPKPEQ ILILESIFHS GMVNPPKEET VRIRKMLEKF GAVGDANVFY WFQNRRSRSR RRQRQLQAAA
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FASSSSSYGG GCDNQSNSGM ENLLTMSGQM SYHEATHHHY QNHSSNVTSI LCPSDQNSNF
201: QYQQGAITVF INGVPTEVTR GGIDMKATFG EDLVLVHSSG VPLPTDEFGF LMHSLQHGEA YFLVIILTQI YFNFLVSFVC FIADRIPREY ICYIVWF

Arabidopsis Description

WOX11WUSCHEL related homeobox 11 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LND8]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.