Factsheet for Bra036446.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21173	Canola	nucleus	98.87	90.66
CDY29949	Canola	nucleus	98.87	90.66
CDY72488	Canola	nucleus, plastid	79.25	85.02
Bra031980.1-P	Field mustard	nucleus	83.02	68.32
AT3G03660.3	Thale cress	nucleus, plastid	83.77	68.1
Bra002108.1-P	Field mustard	nucleus	65.66	63.74
Bra023638.1-P	Field mustard	nucleus	65.66	63.27
VIT_08s0056g01200.t01	Wine grape	nucleus	50.94	57.2
PGSC0003DMT400069529	Potato	nucleus	47.55	51.43
KRG94925	Soybean	nucleus	52.45	49.64
TraesCS2D01G100200.1	Wheat	nucleus	49.43	49.62
Os07t0684900-01	Rice	nucleus	49.06	49.62
TraesCS2B01G117900.1	Wheat	nucleus	48.68	49.43
GSMUA_Achr10P...	Banana	nucleus	45.28	49.18
TraesCS2A01G100700.1	Wheat	nucleus	48.68	48.68
Zm00001d022524_P001	Maize	nucleus	47.55	48.65
Solyc06g072890.1.1	Tomato	nucleus	48.3	48.48
KRH64971	Soybean	nucleus	52.45	47.12
TraesCS4D01G176400.1	Wheat	nucleus	50.19	43.46
TraesCS4B01G174400.1	Wheat	nucleus	50.57	43.37
TraesCS4A01G130200.1	Wheat	nucleus	50.19	43.32
Zm00001d047559_P001	Maize	nucleus	50.57	42.54
KXG39473	Sorghum	nucleus	50.19	42.36
Zm00001d028986_P001	Maize	nucleus	50.57	41.49
TraesCS3A01G073500.1	Wheat	nucleus	40.0	40.77
TraesCS3D01G073300.1	Wheat	nucleus	40.0	40.61
Os08t0242400-01	Rice	nucleus	43.4	40.49
TraesCS3B01G087800.1	Wheat	nucleus	39.62	40.23
OQU90491	Sorghum	nucleus	39.25	40.0
HORVU3Hr1G013290.3	Barley	nucleus	39.25	39.85
KXG24798	Sorghum	nucleus	41.13	39.49
GSMUA_Achr10P...	Banana	nucleus	38.87	38.72
GSMUA_Achr3P09460_001	Banana	nucleus	45.66	37.81
Os03t0325600-01	Rice	nucleus	50.57	37.64
HORVU3Hr1G013330.1	Barley	nucleus	27.55	37.63
GSMUA_Achr6P15910_001	Banana	nucleus	43.77	36.59
Zm00001d024410_P001	Maize	nucleus	39.62	35.71
GSMUA_Achr5P27730_001	Banana	nucleus	41.89	35.58
GSMUA_Achr9P05010_001	Banana	nucleus, plastid	45.28	33.06
HORVU4Hr1G051530.5	Barley	nucleus	40.75	31.3
GSMUA_Achr8P01590_001	Banana	nucleus	44.15	27.86
Bra022008.1-P	Field mustard	nucleus	30.19	25.97
Bra005464.1-P	Field mustard	nucleus	33.58	22.82
Bra012245.1-P	Field mustard	nucleus	11.32	22.56
Bra022960.1-P	Field mustard	nucleus	33.21	22.39
Bra025839.1-P	Field mustard	nucleus	15.09	19.7
Bra028749.1-P	Field mustard	nucleus	10.19	15.52
Bra011623.1-P	Field mustard	nucleus	14.72	15.12
Bra010531.1-P	Field mustard	nucleus	13.21	14.83
Bra017720.1-P	Field mustard	nucleus	14.72	14.72
Bra032212.1-P	Field mustard	nucleus	13.58	14.34
Bra037245.1-P	Field mustard	nucleus	16.6	14.15
Bra017448.1-P	Field mustard	nucleus	14.72	14.13
Bra009132.1-P	Field mustard	nucleus	10.19	14.06
Bra039894.1-P	Field mustard	nucleus	15.85	13.91
Bra014055.1-P	Field mustard	nucleus	13.21	13.62
Bra024485.1-P	Field mustard	nucleus	15.09	13.61
Bra026791.1-P	Field mustard	nucleus	13.21	13.51
Bra035688.1-P	Field mustard	nucleus	11.7	13.25
Bra000484.1-P	Field mustard	nucleus	10.94	12.83
Bra034855.1-P	Field mustard	mitochondrion	6.79	12.59
Bra020321.1-P	Field mustard	nucleus	9.43	12.56
Bra002576.1-P	Field mustard	nucleus	9.06	11.43
Bra001694.1-P	Field mustard	nucleus	13.96	10.48
Bra022267.1-P	Field mustard	nucleus	13.58	10.26

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.6	EnsemblPlantsGene:Bra036446	EnsemblPlants:Bra036446.1	EnsemblPlants:Bra036446.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M4F5U0	PFAM:PF00046
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF185	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0002540F29
SEG:seg	:	:	:	:	:

Description

AT3G03660 (E=7e-091) WOX11 | WOX11 (WUSCHEL related homeobox 11); DNA binding / transcription factor

Coordinates

chrA07:-:444565..445948

Molecular Weight (calculated)

29136.8 Da

IEP (calculated)

6.440

GRAVY (calculated)

-0.526

Length

265 amino acids

Sequence
(BLAST)

001: MDQEQTQHSP TGHSHSPSSP ASGSTSTETV RSRWSPKPEQ ILILESIFNS GMVNPPKEET VRIRKMLEKF GAVGDANVFY WFQNRRSRSR RRQRQLQAAA
101: AAVTTNTCDQ TMMVNTSLPQ YSGADLGFGG CSTSSNYLYA SSSTSSYGGG YDNHSNNGME NLLAMSGQLG YHEASQHHYQ HHSSNLSPMM CPSDQSSSYD
201: HYQQGLTVFI NGVPTEVTSG GIDMKAMFGE DLVLVHSSGV PLPTDEFGFL MHSLQHGEAY FLVIF

Best Arabidopsis Sequence Match ( AT3G03660.4 )
(BLAST)

001: MDQEQTPHSP TRHSRSPPSS ASGSTSAEPV RSRWSPKPEQ ILILESIFHS GMVNPPKEET VRIRKMLEKF GAVGDANVFY WFQNRRSRSR RRQRQLQAAA
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FASSSSSYGG GCDNQSNSGM ENLLTMSGQM SYHEATHHHY QNHSSNVTSI LCPSDQNSNF
201: QYQQGAITVF INGVPTEVTR GGIDMKATFG EDLVLVHSSG VPLPTDEFGF LMHSLQHGEA YFLVIILTQI YFNFLVSFVC FIADRIPREY ICYIVWF

Arabidopsis Description

WOX11WUSCHEL related homeobox 11 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LND8]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.