Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G514000.1 | Wheat | plastid | 91.98 | 93.16 |
| TraesCS2B01G542600.1 | Wheat | plastid | 92.83 | 92.83 |
| Os04t0649400-01 | Rice | plastid | 68.78 | 69.07 |
| OQU82449 | Sorghum | plastid | 65.4 | 63.27 |
| Zm00001d026453_P001 | Maize | plastid | 64.14 | 60.8 |
| GSMUA_Achr8P15620_001 | Banana | nucleus, plastid | 44.73 | 45.3 |
| TraesCS3D01G361100.1 | Wheat | nucleus | 21.52 | 24.29 |
| TraesCS5D01G162600.1 | Wheat | nucleus | 20.68 | 20.25 |
| TraesCS1D01G054000.1 | Wheat | nucleus | 22.78 | 20.22 |
| TraesCS3D01G352600.1 | Wheat | nucleus | 23.63 | 19.65 |
| TraesCS5D01G097400.1 | Wheat | nucleus | 25.74 | 18.94 |
| TraesCS3D01G352500.1 | Wheat | nucleus | 23.63 | 18.79 |
| TraesCS3D01G352700.1 | Wheat | nucleus | 21.1 | 17.18 |
| TraesCS3D01G335500.1 | Wheat | nucleus | 16.46 | 14.83 |
| TraesCS2D01G100200.1 | Wheat | nucleus | 15.19 | 13.64 |
| TraesCS3D01G073300.1 | Wheat | nucleus | 14.35 | 13.03 |
| TraesCS4D01G176400.1 | Wheat | nucleus | 15.61 | 12.09 |
| TraesCS1D01G406900.1 | Wheat | nucleus | 14.77 | 7.2 |
| TraesCS3D01G244300.1 | Wheat | nucleus, plastid | 14.77 | 6.82 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G515600.1 | EnsemblPlantsGene:TraesCS2D01G515600 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF263 |
| PFAM:PF00046 | PFscan:PS50071 | SEG:seg | SMART:SM00389 | SUPFAM:SSF46689 | TIGR:cd00086 |
| MapMan:15.5.3.6 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:606709268..606710213
Molecular Weight (calculated)
25674.6 Da
IEP (calculated)
9.967
GRAVY (calculated)
-0.507
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVHHLHAPS YLEKAASASS SPATAPSTSP PSALFPFGAF QCLRPLAPKI SLPDQPKKLV APPDVLGRVR NATKLLSCTV RNHTVQVQVP VGGTTRWNPS
101: AEQIKVLEAL YRGGMRTPNS AQIERITEEL GRHGRIEGKN VFYWFQNHKA RERQKQKRAA LLTLSTLDSS SLPATATKDG AGDKKEDCDE ATNSCKRRCM
201: TWSAGHGDAA AEVAAPDGCT DNVTLELFPL RPQGKAA
101: AEQIKVLEAL YRGGMRTPNS AQIERITEEL GRHGRIEGKN VFYWFQNHKA RERQKQKRAA LLTLSTLDSS SLPATATKDG AGDKKEDCDE ATNSCKRRCM
201: TWSAGHGDAA AEVAAPDGCT DNVTLELFPL RPQGKAA
001: MKVHEFSNGF SSSWDQHDST SSLSLSCKRL RPLAPKLSGS PPSPPSSSSG VTSATFDLKN FIRPDQTGPT KFEHKRDPPH QLETHPGGTR WNPTQEQIGI
101: LEMLYKGGMR TPNAQQIEHI TLQLGKYGKI EGKNVFYWFQ NHKARERQKQ KRNNLISLSC QSSFTTTGVF NPSVTMKTRT SSSLDIMREP MVEKEELVEE
201: NEYKRTCRSW GFENLEIENR RNKNSSTMAT TFNKIIDNVT LELFPLHPEG R
101: LEMLYKGGMR TPNAQQIEHI TLQLGKYGKI EGKNVFYWFQ NHKARERQKQ KRNNLISLSC QSSFTTTGVF NPSVTMKTRT SSSLDIMREP MVEKEELVEE
201: NEYKRTCRSW GFENLEIENR RNKNSSTMAT TFNKIIDNVT LELFPLHPEG R
Arabidopsis Description
WOX4WUSCHEL-related homeobox 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6X7J9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.