Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G193500.2 | Wheat | cytosol | 86.24 | 86.99 |
| TraesCS7B01G098800.3 | Wheat | cytosol | 85.22 | 86.85 |
| HORVU7Hr1G039480.4 | Barley | cytosol, endoplasmic reticulum | 83.82 | 83.29 |
| GSMUA_Achr9P18250_001 | Banana | cytosol | 10.09 | 62.62 |
| GSMUA_Achr8P25860_001 | Banana | cytosol | 9.62 | 60.89 |
| TraesCS5D01G115000.1 | Wheat | cytosol | 8.37 | 54.59 |
| TraesCS4D01G213600.1 | Wheat | cytosol | 7.74 | 48.53 |
| EER89500 | Sorghum | cytosol | 53.17 | 46.1 |
| Zm00001d037252_P002 | Maize | cytosol | 51.6 | 45.42 |
| TraesCS6D01G219200.1 | Wheat | cytosol | 7.35 | 44.13 |
| TraesCS2D01G367100.1 | Wheat | cytosol | 7.04 | 43.9 |
| TraesCS1D01G165200.1 | Wheat | cytosol | 6.8 | 42.03 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G194800.1 | EnsemblPlantsGene:TraesCS7D01G194800 | Gene3D:2.10.110.10 | InterPro:IPR001781 | InterPro:Znf_LIM | ncoils:Coil |
| PFAM:PF00412 | PFscan:PS50023 | ScanProsite:PS00478 | SEG:seg | SMART:SM00132 | SUPFAM:SSF57716 |
| TIGR:cd09440 | TIGR:cd09441 | MapMan:15.5.41 | : | : | : |
Description
No Description!
Coordinates
chr7D:-:151322611..151328394
Molecular Weight (calculated)
137353.0 Da
IEP (calculated)
4.308
GRAVY (calculated)
-0.971
Length
1279 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAAWGGTTQ KCASCGKKVY PVEELAADGR AYHRPCFRCH HCKSTLQFSN YSSIEGVLYC KPHYDQILKS TGSLEKSFEG VTRAAKSEKS NGPKGQQNSR
0101: FSSMFVGTQD KCVVCNKTVY PLEKVDLNGG SYHKSCFRCT HGGCTLSPSN NVTHEGKLYC KTHHSQLFMV KGNFSQFEEN TANAKVAIEK QPETGEATNK
0201: PGQGDEVSEK TSENELTADE ASQNDVAAEK QSHSIDVAKP SESTVEKSAE SESVSESESK SPVVNNKPLE SSAEKPQQSS VVDAKPSGSS AAIRKPWQRS
0301: LPTNKPLVSS ASTEKPSPSD AAIEKPSSSN GTNGKPSDSS TAVKKSWQRS VATENPQQSM LPSDKPVSTS ADDVKPSESG KVVKKTWQRP VVAENQKQNS
0401: GPTEKPSPKS DTKPLDSSTA IKRPWGRRIA SEKSLQSSEV DMKPVETSTV VTVLQQPSEE PLQTSAAVLQ QPSEEPLQTS AAVLQQPSEE PQQTNAAVLQ
0501: QPSEEPQQTN ADDVKPSEDT AVVVKKPWQF NTRTEKQPQS NVVDAKKTES AGSIKRQWKR NTPFEKPSQS SAAAAVTMTQ SNVTVTKPAP SNMAVKKSWQ
0601: RSTTPKNLAA SDMATNKALQ TKAVIEKPSQ ESSQEKPLQE KAPQITVITE KLPEESSQEK PSQEKAPQTA AIIEKPSQES SQEKPSEAKT PKIAATAENP
0701: SNESSQEKAP QIASITGKPS QESSQEKPLQ MNESSKEQLQ TEETVEKQLQ NEDIADATPQ RNLMTQDDVS LKKVPEPEID ATSGENLSGS QSKPTVEQTL
0801: QSQDVVVTQE AIGQITEAKK DAGVEQSSES RSVAPAEVPV EQPLQRQKDA STEPSSDAIV KESLQPEFDP AAVKSSEPQT DAAADQSAEQ LSEPQSAASV
0901: EEPVVHQSDT STEKPSESQG DAAAGESSGP PSEPQNDASA GEPSEPKVDA ITEERSESQI GAGPHDLTEQ PLEPQKDGRI EKPLETETNV VTDNPSESSL
1001: ATETLPESIP KISTTTEEPA QHEISDETLP QSIALETTPE STAFVEEPAD VGEASVKISD DISAAEKPSE DAVTPEKPSE EVKASVQPAE DNVALEEPSE
1101: EDEVSVEPSS IVDLERPSEE KDDAVKPVED SVALEKPTAD KPSEEDEVSA EPSDDRADLD KPSEKEVDTV VKPSEDSMAV EEPVTDKPSV EDEASAEPSN
1201: DRIDAEKPSE EKEDDTVKSS EDSMALEKPA TDKPSKEEEE GAATEKPSHD DAAIEAPSHH DTDSATDIPS PATETNISA
0101: FSSMFVGTQD KCVVCNKTVY PLEKVDLNGG SYHKSCFRCT HGGCTLSPSN NVTHEGKLYC KTHHSQLFMV KGNFSQFEEN TANAKVAIEK QPETGEATNK
0201: PGQGDEVSEK TSENELTADE ASQNDVAAEK QSHSIDVAKP SESTVEKSAE SESVSESESK SPVVNNKPLE SSAEKPQQSS VVDAKPSGSS AAIRKPWQRS
0301: LPTNKPLVSS ASTEKPSPSD AAIEKPSSSN GTNGKPSDSS TAVKKSWQRS VATENPQQSM LPSDKPVSTS ADDVKPSESG KVVKKTWQRP VVAENQKQNS
0401: GPTEKPSPKS DTKPLDSSTA IKRPWGRRIA SEKSLQSSEV DMKPVETSTV VTVLQQPSEE PLQTSAAVLQ QPSEEPLQTS AAVLQQPSEE PQQTNAAVLQ
0501: QPSEEPQQTN ADDVKPSEDT AVVVKKPWQF NTRTEKQPQS NVVDAKKTES AGSIKRQWKR NTPFEKPSQS SAAAAVTMTQ SNVTVTKPAP SNMAVKKSWQ
0601: RSTTPKNLAA SDMATNKALQ TKAVIEKPSQ ESSQEKPLQE KAPQITVITE KLPEESSQEK PSQEKAPQTA AIIEKPSQES SQEKPSEAKT PKIAATAENP
0701: SNESSQEKAP QIASITGKPS QESSQEKPLQ MNESSKEQLQ TEETVEKQLQ NEDIADATPQ RNLMTQDDVS LKKVPEPEID ATSGENLSGS QSKPTVEQTL
0801: QSQDVVVTQE AIGQITEAKK DAGVEQSSES RSVAPAEVPV EQPLQRQKDA STEPSSDAIV KESLQPEFDP AAVKSSEPQT DAAADQSAEQ LSEPQSAASV
0901: EEPVVHQSDT STEKPSESQG DAAAGESSGP PSEPQNDASA GEPSEPKVDA ITEERSESQI GAGPHDLTEQ PLEPQKDGRI EKPLETETNV VTDNPSESSL
1001: ATETLPESIP KISTTTEEPA QHEISDETLP QSIALETTPE STAFVEEPAD VGEASVKISD DISAAEKPSE DAVTPEKPSE EVKASVQPAE DNVALEEPSE
1101: EDEVSVEPSS IVDLERPSEE KDDAVKPVED SVALEKPTAD KPSEEDEVSA EPSDDRADLD KPSEKEVDTV VKPSEDSMAV EEPVTDKPSV EDEASAEPSN
1201: DRIDAEKPSE EKEDDTVKSS EDSMALEKPA TDKPSKEEEE GAATEKPSHD DAAIEAPSHH DTDSATDIPS PATETNISA
001: MAFAGTTQKC MACDKTVYLV DKLTADNRVY HKACFRCHHC KGTLKLSNYN SFEGVLYCRP HFDQNFKRTG SLEKSFEGTP KIGKPDRPLE GERPAGTKVS
101: NMFGGTREKC VGCDKTVYPI EKVSVNGTLY HKSCFKCTHG GCTISPSNYI AHEGKLYCKH HHIQLIKEKG NLSQLEGGGE NAAKDKVVAA
101: NMFGGTREKC VGCDKTVYPI EKVSVNGTLY HKSCFKCTHG GCTISPSNYI AHEGKLYCKH HHIQLIKEKG NLSQLEGGGE NAAKDKVVAA
Arabidopsis Description
WLIM1WLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178W4R1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.