Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d037252_P002 | Maize | cytosol | 87.19 | 88.51 |
| GSMUA_Achr9P18250_001 | Banana | cytosol | 8.54 | 61.16 |
| GSMUA_Achr8P25860_001 | Banana | cytosol | 8.34 | 60.89 |
| EES16055 | Sorghum | cytosol | 7.59 | 57.73 |
| TraesCS7A01G193500.2 | Wheat | cytosol | 46.44 | 54.02 |
| TraesCS7B01G098800.3 | Wheat | cytosol | 45.49 | 53.47 |
| TraesCS7D01G194800.1 | Wheat | cytosol | 46.1 | 53.17 |
| HORVU7Hr1G039480.4 | Barley | cytosol, endoplasmic reticulum | 44.75 | 51.28 |
| EER95125 | Sorghum | cytosol | 6.44 | 48.22 |
| EES05836 | Sorghum | cytosol | 6.1 | 45.0 |
| EES12556 | Sorghum | cytosol | 6.03 | 43.84 |
Protein Annotations
| EnsemblPlants:EER89500 | EnsemblPlantsGene:SORBI_3010G097600 | Gene3D:2.10.110.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 |
| InterPro:IPR001781 | InterPro:Znf_LIM | ncoils:Coil | PFAM:PF00412 | PFscan:PS50023 | ProteinID:EER89500 |
| ProteinID:EER89500.2 | ScanProsite:PS00478 | SEG:seg | SMART:SM00132 | SUPFAM:SSF57716 | unigene:Sbi.3037 |
| UniParc:UPI0007F21E9C | UniProt:C5Z7H7 | MapMan:15.5.41 | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:8834293..8842412
Molecular Weight (calculated)
158988.0 Da
IEP (calculated)
4.345
GRAVY (calculated)
-0.976
Length
1475 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSGAWGGTTQ KCASCGRTVY PVEELAADGR VYHRPCFRCH HCKSTLQFSN YSSVEGVLYC KPHYDQILKS TGSLEKSFEG VARSAKSEKS NGHKGQQSSR
0101: FSNMFVGTQE KCVVCNKTVY PLEKVALNGN SYHKSCFRCT HGGCTLSPSN HITHEGKLYC KTHHSQLFMV KGNFSQFEDN SGNAKVASEK QPETEEATKN
0201: PNQGDEVTQK PVENEPIDEK TSKNDVAAEK QLQSSVDVTK PSESTMAENE RGTESESKSN VVNNKPSESS VEKPLQNSVV DVKPSGNSAA MRKPWQRSLQ
0301: TDKPFLSSTS TVKPSPSSDA TEKPSSSNGV DMRQPESSTL VKKPGQQNVP TENPPQIVLP SDKPSATSVD DAKPSESSKV VKKPWQRNMA AEKQLQNSAP
0401: TEKSHKSVAT DKPSPTTDMK SLDNTTEVKS PWGRRMFNNK SLKSTVGTEK SSATSVVDVR PGETSTVAPV PQQQTENVEK PSDTSADDAK SADDVKSADD
0501: VKSADDVKLL VASPDDTKSA DDTKTTDGVK PSETTAAVVR KSWQRNIDTG KQPLTTAVDP KTTEASGTVK RLWQRSAATE KLSQSGTAVV KPLQSSVAVS
0601: KPFQSNVAVK KTWQRSVTPE NQRESNMSSN KPLASKVVVE SLVQSNTVEK MFQSNVPTEE PQKVIVATEN QSQTIKVTKK SNDTSMKLSV TSETTKVPPL
0701: AATALQSDVS TEKPSQTDMP TITPSQIPEP TEKPSESAFN AEKLSNVDTA TEKPLQSMIT EKVESVAATL KPSQSDTAPQ EILERNMDTE KILQSAMAVE
0801: KPPPTNLITE KPSIKDASEE PVQTNEQSEQ PLKTEEVEKP HQSEKIAAET KGSEVSIENM LELESNATKL NKDHSEPEGL SSGTNPPDFQ SNPNAGQQLE
0901: SKGIVAEKEA DNIMEAKNDA VAEHSSESQH VAPAEVPKEQ PSEHQKDADM QLLLEPQNED HSGNPLEPVS DTAAKDSSEP KSDIATEKTA ESQNNADQSV
1001: EQSPEPQSDK STEKPEVHQS STPSDELSRL QSDAGADKLS VPSSDPESNA SVSKPSESQT DVITMEAPEL QIDALPDKAT DQPVKPQDDA SAKKPMGTES
1101: DAACDKPSES SSDTETLPVC HQNSSITTDE PVQGDISYET PHQRSAPIET TPGSDTVVED CIHHEDTSSK PSEENKAIEE PEEVSAKLPD DHVTSEKSSE
1201: EDKENAEPSV DNAPLGKPLE ANEESSKSSG DTVTPEKPLE EDETSAEPSE SDASFGKLLE ADEVSANPSE DIATPEKPLE EGVASVEPSE DNSVLDKPLK
1301: EEEVTAKPSK DVVTPEKPLE EGSTTAERLE DNAAIGEAKE EDEVIPKPES SVALEKSLEG SEASVEPLED NAALEKPSED DEANAKSSED SVAVEKPQQE
1401: EDNVATEKPQ QEEDNGVKAL EEDVSPEKSA NGKPLEEEDP VHEKLADADT VVEPSSQDDT ATEKPSATTD TAETA
0101: FSNMFVGTQE KCVVCNKTVY PLEKVALNGN SYHKSCFRCT HGGCTLSPSN HITHEGKLYC KTHHSQLFMV KGNFSQFEDN SGNAKVASEK QPETEEATKN
0201: PNQGDEVTQK PVENEPIDEK TSKNDVAAEK QLQSSVDVTK PSESTMAENE RGTESESKSN VVNNKPSESS VEKPLQNSVV DVKPSGNSAA MRKPWQRSLQ
0301: TDKPFLSSTS TVKPSPSSDA TEKPSSSNGV DMRQPESSTL VKKPGQQNVP TENPPQIVLP SDKPSATSVD DAKPSESSKV VKKPWQRNMA AEKQLQNSAP
0401: TEKSHKSVAT DKPSPTTDMK SLDNTTEVKS PWGRRMFNNK SLKSTVGTEK SSATSVVDVR PGETSTVAPV PQQQTENVEK PSDTSADDAK SADDVKSADD
0501: VKSADDVKLL VASPDDTKSA DDTKTTDGVK PSETTAAVVR KSWQRNIDTG KQPLTTAVDP KTTEASGTVK RLWQRSAATE KLSQSGTAVV KPLQSSVAVS
0601: KPFQSNVAVK KTWQRSVTPE NQRESNMSSN KPLASKVVVE SLVQSNTVEK MFQSNVPTEE PQKVIVATEN QSQTIKVTKK SNDTSMKLSV TSETTKVPPL
0701: AATALQSDVS TEKPSQTDMP TITPSQIPEP TEKPSESAFN AEKLSNVDTA TEKPLQSMIT EKVESVAATL KPSQSDTAPQ EILERNMDTE KILQSAMAVE
0801: KPPPTNLITE KPSIKDASEE PVQTNEQSEQ PLKTEEVEKP HQSEKIAAET KGSEVSIENM LELESNATKL NKDHSEPEGL SSGTNPPDFQ SNPNAGQQLE
0901: SKGIVAEKEA DNIMEAKNDA VAEHSSESQH VAPAEVPKEQ PSEHQKDADM QLLLEPQNED HSGNPLEPVS DTAAKDSSEP KSDIATEKTA ESQNNADQSV
1001: EQSPEPQSDK STEKPEVHQS STPSDELSRL QSDAGADKLS VPSSDPESNA SVSKPSESQT DVITMEAPEL QIDALPDKAT DQPVKPQDDA SAKKPMGTES
1101: DAACDKPSES SSDTETLPVC HQNSSITTDE PVQGDISYET PHQRSAPIET TPGSDTVVED CIHHEDTSSK PSEENKAIEE PEEVSAKLPD DHVTSEKSSE
1201: EDKENAEPSV DNAPLGKPLE ANEESSKSSG DTVTPEKPLE EDETSAEPSE SDASFGKLLE ADEVSANPSE DIATPEKPLE EGVASVEPSE DNSVLDKPLK
1301: EEEVTAKPSK DVVTPEKPLE EGSTTAERLE DNAAIGEAKE EDEVIPKPES SVALEKSLEG SEASVEPLED NAALEKPSED DEANAKSSED SVAVEKPQQE
1401: EDNVATEKPQ QEEDNGVKAL EEDVSPEKSA NGKPLEEEDP VHEKLADADT VVEPSSQDDT ATEKPSATTD TAETA
001: MAFAGTTQKC MACDKTVYLV DKLTADNRVY HKACFRCHHC KGTLKLSNYN SFEGVLYCRP HFDQNFKRTG SLEKSFEGTP KIGKPDRPLE GERPAGTKVS
101: NMFGGTREKC VGCDKTVYPI EKVSVNGTLY HKSCFKCTHG GCTISPSNYI AHEGKLYCKH HHIQLIKEKG NLSQLEGGGE NAAKDKVVAA
101: NMFGGTREKC VGCDKTVYPI EKVSVNGTLY HKSCFKCTHG GCTISPSNYI AHEGKLYCKH HHIQLIKEKG NLSQLEGGGE NAAKDKVVAA
Arabidopsis Description
WLIM1WLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178W4R1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.