Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G370800.1 | Wheat | cytosol | 98.54 | 99.51 |
| TraesCS2B01G388000.1 | Wheat | cytosol | 98.05 | 97.57 |
| EES12556 | Sorghum | cytosol | 88.29 | 89.16 |
| Zm00001d002844_P003 | Maize | cytosol | 86.34 | 85.92 |
| Os04t0532500-01 | Rice | plasma membrane | 83.9 | 85.57 |
| Zm00001d025926_P001 | Maize | cytosol | 85.37 | 85.37 |
| GSMUA_Achr1P03020_001 | Banana | cytosol | 64.39 | 74.16 |
| TraesCS6D01G219200.1 | Wheat | cytosol | 75.12 | 72.3 |
| GSMUA_Achr4P29420_001 | Banana | cytosol | 69.76 | 71.14 |
| GSMUA_Achr2P18580_001 | Banana | cytosol | 63.41 | 69.89 |
| GSMUA_Achr5P20680_001 | Banana | cytosol | 66.34 | 67.66 |
| GSMUA_Achr11P... | Banana | cytosol | 65.85 | 67.5 |
| GSMUA_Achr2P11440_001 | Banana | cytosol | 65.37 | 67.0 |
| TraesCS1D01G165200.1 | Wheat | cytosol | 65.37 | 64.73 |
| VIT_02s0025g03980.t01 | Wine grape | cytosol | 60.98 | 58.14 |
| TraesCS4D01G213600.1 | Wheat | cytosol | 56.59 | 56.86 |
| PGSC0003DMT400014797 | Potato | cytosol | 43.9 | 53.57 |
| Solyc08g080740.2.1 | Tomato | cytosol | 50.24 | 53.09 |
| Solyc08g007940.2.1 | Tomato | cytosol | 53.17 | 52.91 |
| KRH59846 | Soybean | cytosol | 57.07 | 52.23 |
| KRH41147 | Soybean | cytosol | 56.1 | 50.44 |
| HORVU5Hr1G031550.3 | Barley | cytosol | 23.41 | 48.48 |
| TraesCS5D01G115000.1 | Wheat | cytosol | 44.88 | 46.94 |
| PGSC0003DMT400007915 | Potato | cytosol | 45.85 | 42.15 |
| TraesCS7D01G194800.1 | Wheat | cytosol | 43.9 | 7.04 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G367100.1 | EnsemblPlantsGene:TraesCS2D01G367100 | Gene3D:2.10.110.10 | InterPro:IPR001781 | InterPro:Znf_LIM | PANTHER:PTHR24206 |
| PANTHER:PTHR24206:SF30 | PFAM:PF00412 | PFscan:PS50023 | ScanProsite:PS00478 | SEG:seg | SMART:SM00132 |
| SUPFAM:SSF57716 | TIGR:cd09440 | MapMan:15.5.41 | : | : | : |
Description
No Description!
Coordinates
chr2D:+:472070135..472071218
Molecular Weight (calculated)
22443.7 Da
IEP (calculated)
7.602
GRAVY (calculated)
-0.321
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFTGTQDKC FACEKTVHFI DLLTADGVIY HKTCFKCSHC KGILSMCSYS SMDGVLYCKT HFEQLFKETG SFSKKFTPAG NKSGDKNELS RAPSKLSAAF
101: SGTQDKCAAC TKTVYPLEKM TLEGDAYHKS CFKCSHGGCI LTTSSYAALN GVLYCKIHFQ QLFMEKGSYS HMKKKSPSQE VLPDLVAAAA EEQPAAEAAP
201: PQDEE
101: SGTQDKCAAC TKTVYPLEKM TLEGDAYHKS CFKCSHGGCI LTTSSYAALN GVLYCKIHFQ QLFMEKGSYS HMKKKSPSQE VLPDLVAAAA EEQPAAEAAP
201: PQDEE
001: MSFTGTLDKC NVCDKTVYVV DMLSIEGMPY HKSCFRCTHC KGTLQMSNYS SMDGVLYCKT HFEQLFKESG NFSKNFQPGK TEKPELTRTP SKISSIFCGT
101: QDKCAACEKT VYPLEKIQME GECFHKTCFR CAHGGCTLTH SSYASLDSVL YCRHHFNQLF MEKGNYAHVL QAANHRRTAS GNTLPPEPTE DVAVEAKEEN
201: GVSES
101: QDKCAACEKT VYPLEKIQME GECFHKTCFR CAHGGCTLTH SSYASLDSVL YCRHHFNQLF MEKGNYAHVL QAANHRRTAS GNTLPPEPTE DVAVEAKEEN
201: GVSES
Arabidopsis Description
PLIM2BLIM domain-containing protein PLIM2b [Source:UniProtKB/Swiss-Prot;Acc:Q1ECF5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.