Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400007915 | Potato | cytosol | 86.08 | 74.89 |
| Solyc08g007940.2.1 | Tomato | cytosol | 70.62 | 66.5 |
| Solyc05g052780.2.1 | Tomato | cytosol | 57.73 | 59.26 |
| GSMUA_Achr1P03020_001 | Banana | cytosol | 53.09 | 57.87 |
| VIT_02s0025g03980.t01 | Wine grape | cytosol | 60.82 | 54.88 |
| GSMUA_Achr4P29420_001 | Banana | cytosol | 56.7 | 54.73 |
| EES05836 | Sorghum | cytosol | 56.19 | 54.5 |
| KRH59846 | Soybean | cytosol | 62.89 | 54.46 |
| GSMUA_Achr2P18580_001 | Banana | cytosol | 52.06 | 54.3 |
| KRH41147 | Soybean | cytosol | 62.89 | 53.51 |
| GSMUA_Achr2P11440_001 | Banana | cytosol | 55.15 | 53.5 |
| Zm00001d051262_P001 | Maize | cytosol | 56.19 | 52.66 |
| Os04t0532500-01 | Rice | plasma membrane | 53.61 | 51.74 |
| TraesCS6B01G265100.1 | Wheat | cytosol | 55.15 | 51.69 |
| GSMUA_Achr11P... | Banana | cytosol | 53.09 | 51.5 |
| EES12556 | Sorghum | cytosol | 53.09 | 50.74 |
| TraesCS2A01G370800.1 | Wheat | cytosol | 53.09 | 50.74 |
| TraesCS6A01G236600.1 | Wheat | cytosol | 55.15 | 50.47 |
| TraesCS2D01G367100.1 | Wheat | cytosol | 53.09 | 50.24 |
| TraesCS6D01G219200.1 | Wheat | cytosol | 55.15 | 50.23 |
| TraesCS2B01G388000.1 | Wheat | cytosol | 53.09 | 50.0 |
| Zm00001d025926_P001 | Maize | cytosol | 52.58 | 49.76 |
| GSMUA_Achr5P20680_001 | Banana | cytosol | 51.55 | 49.75 |
| Zm00001d002844_P003 | Maize | cytosol | 52.58 | 49.51 |
| Solyc06g071310.2.1 | Tomato | cytosol | 45.36 | 49.16 |
| Solyc10g017520.2.1 | Tomato | cytosol | 53.61 | 49.06 |
| Os02t0641000-00 | Rice | mitochondrion | 38.66 | 48.7 |
| Solyc01g094320.2.1 | Tomato | cytosol | 55.67 | 48.43 |
| TraesCS1A01G173600.1 | Wheat | cytosol | 48.45 | 47.0 |
| Solyc03g114000.2.1 | Tomato | cytosol | 45.36 | 46.56 |
| TraesCS1D01G165200.1 | Wheat | cytosol | 48.97 | 45.89 |
| Solyc05g049870.2.1 | Tomato | cytosol | 53.61 | 45.61 |
| TraesCS1B01G190800.1 | Wheat | cytosol | 48.45 | 45.19 |
| Zm00001d017382_P001 | Maize | cytosol | 56.7 | 44.53 |
| Solyc11g044740.1.1 | Tomato | cytosol | 43.81 | 44.04 |
| Solyc12g088320.1.1 | Tomato | cytosol | 42.27 | 43.85 |
| Solyc04g077780.2.1 | Tomato | cytosol | 41.24 | 41.45 |
| HORVU6Hr1G060580.5 | Barley | plastid | 39.69 | 37.38 |
| HORVU5Hr1G031550.3 | Barley | cytosol | 15.46 | 30.3 |
Protein Annotations
| EnsemblPlants:Solyc08g080740.2.1 | EnsemblPlantsGene:Solyc08g080740.2 | Gene3D:2.10.110.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 |
| InterPro:IPR001781 | InterPro:Znf_LIM | PANTHER:PTHR24206 | PANTHER:PTHR24206:SF54 | PFAM:PF00412 | PFscan:PS50023 |
| ScanProsite:PS00478 | SMART:SM00132 | SUPFAM:SSF57716 | UniParc:UPI000276BAEA | UniProt:K4CP72 | MapMan:15.5.41 |
Description
No Description!
Coordinates
chr8:-:63946325..63948470
Molecular Weight (calculated)
21441.6 Da
IEP (calculated)
9.018
GRAVY (calculated)
-0.464
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFTGAPQKC KVCEKTVYIA EMISTSGVAY HNTCFRCNHC NGRLALSTYS TLDGVLYCKP HFEQIYKEKG GAPLKHSASL GRQNELNRSS SKVSALFSGT
101: QDKCAACKKT VYPLEKVTVD GEMYHKICFR CVHGGCKLTT SSYAAFDGGL YCKPHFSQLF KEKGSYNHLS KNASMKKNES LINVEQEGSS TNTR
101: QDKCAACKKT VYPLEKVTVD GEMYHKICFR CVHGGCKLTT SSYAAFDGGL YCKPHFSQLF KEKGSYNHLS KNASMKKNES LINVEQEGSS TNTR
001: MSFTGTQQKC KACEKTVYAV ELLSADGVGY HKSCFKCTHC KSRLQLSSYS SMEGVLYCKP HFEQLFKESG SFNKNFQSPA KSADKSTPEL TRTPSRVAGR
101: FSGTQEKCAT CSKTVYPIEK VTVESQTYHK SCFKCSHGGC PISPSNYAAL EGILYCKHHF AQLFKEKGSY NHLIKSASIK RSAAAAVAAG VPAASVPES
101: FSGTQEKCAT CSKTVYPIEK VTVESQTYHK SCFKCSHGGC PISPSNYAAL EGILYCKHHF AQLFKEKGSY NHLIKSASIK RSAAAAVAAG VPAASVPES
Arabidopsis Description
GATA type zinc finger transcription factor family protein [Source:TAIR;Acc:AT3G55770]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.