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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G165200.1 Wheat cytosol 97.5 94.2
TraesCS1B01G190800.1 Wheat cytosol 97.5 93.75
GSMUA_Achr1P03020_001 Banana cytosol 63.0 70.79
GSMUA_Achr4P29420_001 Banana cytosol 67.5 67.16
GSMUA_Achr2P18580_001 Banana cytosol 61.5 66.13
TraesCS6A01G236600.1 Wheat cytosol 70.0 66.04
TraesCS2A01G370800.1 Wheat cytosol 66.0 65.02
GSMUA_Achr5P20680_001 Banana cytosol 64.5 64.18
GSMUA_Achr11P... Banana cytosol 64.0 64.0
GSMUA_Achr2P11440_001 Banana cytosol 62.5 62.5
VIT_02s0025g03980.t01 Wine grape cytosol 57.5 53.49
Solyc08g007940.2.1 Tomato cytosol 52.0 50.49
PGSC0003DMT400014797 Potato cytosol 42.0 50.0
KRH59846 Soybean cytosol 55.5 49.55
Solyc08g080740.2.1 Tomato cytosol 47.0 48.45
KRH41147 Soybean cytosol 54.5 47.81
PGSC0003DMT400007915 Potato cytosol 43.0 38.56
TraesCS5A01G103100.2 Wheat cytosol 43.5 37.02
TraesCS7A01G193500.2 Wheat cytosol 42.5 6.7
Protein Annotations
EnsemblPlants:TraesCS1A01G173600.1EnsemblPlantsGene:TraesCS1A01G173600Gene3D:2.10.110.10InterPro:IPR001781InterPro:Znf_LIMPANTHER:PTHR24206
PANTHER:PTHR24206:SF33PFAM:PF00412PFscan:PS50023ScanProsite:PS00478SEG:segSMART:SM00132
SUPFAM:SSF57716TIGR:cd09440MapMan:15.5.41:::
Description
No Description!
Coordinates
chr1A:-:309740367..309741639
Molecular Weight (calculated)
22230.3 Da
IEP (calculated)
7.288
GRAVY (calculated)
-0.505
Length
200 amino acids
Sequence
(BLAST)
001: MTFYGTQDKC KACDKTVHFI DLLTADGIPY HKYCFKCSHC KGTLSMCSYS SMDGVLFCKT HFEQLFKETG SFKKNFPTCA KANNEQSKVP NKYGSVFCGT
101: QDKCAACKKT VYPLEKMTLE GEPYHKTCFK CAHGGCILTT ASCASLNGIL YCQNHFWQLF KETGSYSNLL KPASAKNADE PEAAKEEEQA PEAAEDQESS
Best Arabidopsis Sequence Match ( AT1G01780.1 )
(BLAST)
001: MSFTGTLDKC NVCDKTVYVV DMLSIEGMPY HKSCFRCTHC KGTLQMSNYS SMDGVLYCKT HFEQLFKESG NFSKNFQPGK TEKPELTRTP SKISSIFCGT
101: QDKCAACEKT VYPLEKIQME GECFHKTCFR CAHGGCTLTH SSYASLDSVL YCRHHFNQLF MEKGNYAHVL QAANHRRTAS GNTLPPEPTE DVAVEAKEEN
201: GVSES
Arabidopsis Description
PLIM2BLIM domain-containing protein PLIM2b [Source:UniProtKB/Swiss-Prot;Acc:Q1ECF5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.