Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH59846 | Soybean | cytosol | 94.3 | 95.98 |
| VIT_02s0025g03980.t01 | Wine grape | cytosol | 61.4 | 65.12 |
| KRH15005 | Soybean | cytosol | 53.07 | 64.02 |
| GSMUA_Achr1P03020_001 | Banana | cytosol | 49.12 | 62.92 |
| Solyc08g080740.2.1 | Tomato | cytosol | 53.51 | 62.89 |
| GSMUA_Achr4P29420_001 | Banana | cytosol | 54.39 | 61.69 |
| KRG97787 | Soybean | cytosol | 53.07 | 61.11 |
| KRH31081 | Soybean | cytosol | 53.51 | 61.0 |
| GSMUA_Achr2P18580_001 | Banana | cytosol | 49.56 | 60.75 |
| PGSC0003DMT400014797 | Potato | cytosol | 44.74 | 60.71 |
| EES05836 | Sorghum | cytosol | 53.07 | 60.5 |
| Zm00001d051262_P001 | Maize | cytosol | 53.95 | 59.42 |
| Solyc08g007940.2.1 | Tomato | cytosol | 53.07 | 58.74 |
| EES12556 | Sorghum | cytosol | 51.32 | 57.64 |
| TraesCS6B01G265100.1 | Wheat | cytosol | 52.19 | 57.49 |
| Os04t0532500-01 | Rice | plasma membrane | 50.44 | 57.21 |
| GSMUA_Achr2P11440_001 | Banana | cytosol | 50.0 | 57.0 |
| Zm00001d002844_P003 | Maize | cytosol | 51.32 | 56.8 |
| TraesCS2A01G370800.1 | Wheat | cytosol | 50.0 | 56.16 |
| TraesCS6A01G236600.1 | Wheat | cytosol | 52.19 | 56.13 |
| TraesCS2D01G367100.1 | Wheat | cytosol | 50.44 | 56.1 |
| GSMUA_Achr11P... | Banana | cytosol | 49.12 | 56.0 |
| TraesCS6D01G219200.1 | Wheat | cytosol | 52.19 | 55.87 |
| Zm00001d025926_P001 | Maize | cytosol | 50.0 | 55.61 |
| TraesCS2B01G388000.1 | Wheat | cytosol | 50.0 | 55.34 |
| GSMUA_Achr5P20680_001 | Banana | cytosol | 48.68 | 55.22 |
| TraesCS1A01G173600.1 | Wheat | cytosol | 47.81 | 54.5 |
| KRH65108 | Soybean | cytosol | 48.25 | 53.4 |
| TraesCS1D01G165200.1 | Wheat | cytosol | 48.25 | 53.14 |
| TraesCS1B01G190800.1 | Wheat | cytosol | 48.25 | 52.88 |
| KRH48190 | Soybean | cytosol | 46.93 | 50.95 |
| KRH05574 | Soybean | cytosol | 43.42 | 50.51 |
| KRG88767 | Soybean | cytosol | 43.42 | 50.51 |
| KRH61425 | Soybean | cytosol | 43.42 | 50.51 |
| KRH00704 | Soybean | cytosol | 47.81 | 50.46 |
| Os02t0641000-00 | Rice | mitochondrion | 33.77 | 50.0 |
| KRH52104 | Soybean | cytosol | 42.98 | 50.0 |
| Zm00001d017382_P001 | Maize | cytosol | 53.95 | 49.8 |
| KRH54438 | Soybean | cytosol | 41.67 | 49.48 |
| PGSC0003DMT400007915 | Potato | cytosol | 48.25 | 49.33 |
| KRH40492 | Soybean | cytosol | 47.37 | 49.32 |
| KRH35659 | Soybean | cytosol | 37.72 | 47.78 |
| KRH33303 | Soybean | cytosol | 11.4 | 47.27 |
| KRH63478 | Soybean | cytosol | 40.79 | 45.59 |
| KRH03352 | Soybean | cytosol | 41.23 | 44.98 |
| KRH57029 | Soybean | cytosol | 41.23 | 43.72 |
| KRG93772 | Soybean | cytosol | 13.6 | 42.47 |
| HORVU6Hr1G060580.5 | Barley | plastid | 36.84 | 40.78 |
| KRH73124 | Soybean | cytosol | 28.95 | 39.29 |
| KRG90348 | Soybean | cytosol | 12.28 | 38.89 |
| HORVU5Hr1G031550.3 | Barley | cytosol | 14.47 | 33.33 |
Protein Annotations
| EMBL:ACUP02004750 | EnsemblPlants:KRH41147 | EnsemblPlantsGene:GLYMA_08G012700 | EntrezGene:100809605 | Gene3D:2.10.110.10 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR001781 | InterPro:Znf_LIM | PANTHER:PTHR24206 | PANTHER:PTHR24206:SF54 |
| PFAM:PF00412 | PFscan:PS50023 | ProteinID:KRH41147 | ProteinID:KRH41147.1 | ScanProsite:PS00478 | SEG:seg |
| SMART:SM00132 | SUPFAM:SSF57716 | UniParc:UPI00023382AC | UniProt:K7L4D1 | MapMan:15.5.41 | : |
Description
hypothetical protein
Coordinates
chr8:-:990727..992879
Molecular Weight (calculated)
25482.7 Da
IEP (calculated)
6.763
GRAVY (calculated)
-0.755
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFSGTQQKC KACDKTVHLV EGLSVDGAAY HKNCFRCSHC NGLLAISNYS STEGVLYCKV HFEQLFKETG AYPKKSQSSG KPPLELNRAP SKLSAFFSGT
101: QEKCSKCKKT VYPLEKLTVE GEFYHKSCFR CAHGGCFLTP STYAALDGYL YCKPHFSQLF KEKGSYSYLS KQTSLKKSEM QQEQEAVEKT TTTTTTDDDR
201: SEPEPETTTT TTTMEAEQAD DDHSEQEH
101: QEKCSKCKKT VYPLEKLTVE GEFYHKSCFR CAHGGCFLTP STYAALDGYL YCKPHFSQLF KEKGSYSYLS KQTSLKKSEM QQEQEAVEKT TTTTTTDDDR
201: SEPEPETTTT TTTMEAEQAD DDHSEQEH
001: MSFTGTQQKC RACEKTVYPV ELLSADGISY HKACFKCSHC KSRLQLSNYS SMEGVVYCRP HFEQLFKESG SFSKNFQSPA KPLTDKPTPE LNRTPSRLAG
101: MFSGTQDKCA TCTKTVYPIE KVTVESQCYH KSCFKCSHGG CPISPSNYAA LEGILYCKHH FAQLFKEKGS YNHLIKSASI KRATAAATAA AAAVAAVPES
101: MFSGTQDKCA TCTKTVYPIE KVTVESQCYH KSCFKCSHGG CPISPSNYAA LEGILYCKHH FAQLFKEKGS YNHLIKSASI KRATAAATAA AAAVAAVPES
Arabidopsis Description
WLIN2AWLIM2a [Source:UniProtKB/TrEMBL;Acc:A0A178VU35]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.