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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • plastid 1
  • cytosol 2
  • nucleus 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH33303 Soybean cytosol 18.45 56.36
KRH15005 Soybean cytosol 54.76 48.68
KRG90348 Soybean cytosol 20.24 47.22
VIT_13s0019g03280.t01 Wine grape cytosol 51.79 46.03
KRG97787 Soybean cytosol 53.57 45.45
KRH31081 Soybean cytosol 53.57 45.0
PGSC0003DMT400069763 Potato cytosol 47.62 42.33
Solyc05g052780.2.1 Tomato cytosol 47.62 42.33
GSMUA_Achr6P14980_001 Banana cytosol 46.43 41.05
GSMUA_Achr10P... Banana cytosol 45.83 40.53
KRG93772 Soybean cytosol 17.26 39.73
Bra005003.1-P Field mustard cytosol 47.02 39.7
CDX74822 Canola cytosol 47.02 39.5
CDY20498 Canola cytosol 47.02 39.5
CDY60999 Canola cytosol 47.02 39.5
CDX72203 Canola cytosol 46.43 38.81
Bra007189.1-P Field mustard cytosol 46.43 38.81
CDY27267 Canola cytosol 46.43 38.81
AT2G39900.1 Thale cress cytosol 45.83 38.5
Os03t0266100-01 Rice plasma membrane 43.45 37.24
EER95125 Sorghum cytosol 43.45 37.06
Zm00001d028550_P001 Maize extracellular, mitochondrion 43.45 36.87
TraesCS4B01G212600.1 Wheat cytosol 43.45 35.78
TraesCS4D01G213600.1 Wheat cytosol 43.45 35.78
KRH35659 Soybean cytosol 36.9 34.44
KRH65108 Soybean cytosol 41.07 33.5
KRH61425 Soybean cytosol 38.69 33.16
KRH52104 Soybean cytosol 38.69 33.16
AT3G55770.7 Thale cress cytosol 45.83 33.05
KRH54438 Soybean cytosol 37.5 32.81
KRH48190 Soybean cytosol 40.48 32.38
KRH05574 Soybean cytosol 37.5 32.14
KRG88767 Soybean cytosol 37.5 32.14
KRH40492 Soybean cytosol 39.88 30.59
KRH00704 Soybean cytosol 39.29 30.56
CDY02959 Canola mitochondrion 48.81 30.48
KRH63478 Soybean cytosol 36.9 30.39
CDX76073 Canola mitochondrion 48.21 30.0
KRH59846 Soybean cytosol 39.88 29.91
KRH03352 Soybean cytosol 36.31 29.19
KRH41147 Soybean cytosol 39.29 28.95
KRH57029 Soybean cytosol 35.71 27.91
Bra014721.1-P Field mustard cytosol, mitochondrion 47.02 25.4
Protein Annotations
EMBL:ACUP02001266EnsemblPlants:KRH73124EnsemblPlantsGene:GLYMA_02G253700EntrezGene:100818168Gene3D:2.10.110.10GO:GO:0003674
GO:GO:0005488GO:GO:0046872InterPro:IPR001781InterPro:Znf_LIMPANTHER:PTHR24206PANTHER:PTHR24206:SF28
PFAM:PF00412PFscan:PS50023ProteinID:KRH73124ProteinID:KRH73124.1SMART:SM00132SUPFAM:SSF57716
UniParc:UPI0006EDFA96UniProt:A0A0R0LB42MapMan:15.5.41:::
Description
hypothetical protein
Coordinates
chr2:-:44084898..44087376
Molecular Weight (calculated)
18799.8 Da
IEP (calculated)
9.962
GRAVY (calculated)
-0.283
Length
168 amino acids
Sequence
(BLAST)
001: MSLSVSESLF TTSPICHFSL FYQQVVGLVH LDQKARDMSF IGTQQKCKAC GKTVYPVDQL SAYHKACFKC SHCEGTLKLS NYSSMESVLY CKPHNEQLFK
101: ETGSFKKNFQ SPSKQADKTT PELTRSPSKA ASMFSGTKKS VLHVAKLLIR WRRPITNLVS NVHMAAVP
Best Arabidopsis Sequence Match ( AT3G55770.3 )
(BLAST)
001: MSFTGTQQKC KACEKTVYAV ELLSADGVGY HKSCFKCTHC KSRLQLSSYS SMEGVLYCKP HFEQLFKESG SFNKNFQSPA KSADKSTPEL TRTPSRVAGR
101: FSGTQEKCAT CSKTVYPIEK VTVESQTYHK SCFKCSHGGC PISPSNYAAL EGILYCKHHF AQLFKEKGSY NHLIKSASIK RSAAAAVAAG VPAASVPES
Arabidopsis Description
GATA type zinc finger transcription factor family protein [Source:TAIR;Acc:AT3G55770]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.