Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH40492 | Soybean | cytosol | 96.3 | 94.98 |
| KRH65108 | Soybean | cytosol | 72.69 | 76.21 |
| KRH48190 | Soybean | cytosol | 73.61 | 75.71 |
| CDY45697 | Canola | cytosol | 56.94 | 67.96 |
| AT3G61230.1 | Thale cress | cytosol | 66.67 | 67.61 |
| Bra032650.1-P | Field mustard | cytosol | 63.89 | 67.32 |
| CDY38028 | Canola | cytosol | 63.43 | 66.83 |
| CDY56926 | Canola | cytosol | 65.28 | 66.51 |
| CDX90059 | Canola | cytosol | 62.96 | 66.34 |
| CDY15152 | Canola | cytosol | 62.96 | 66.34 |
| CDY01571 | Canola | cytosol | 62.96 | 66.34 |
| AT1G01780.1 | Thale cress | cytosol | 62.96 | 66.34 |
| Bra033233.1-P | Field mustard | cytosol | 62.96 | 66.34 |
| CDX71757 | Canola | cytosol | 66.2 | 66.2 |
| VIT_15s0046g03370.t01 | Wine grape | cytosol | 67.13 | 65.91 |
| CDX89105 | Canola | cytosol | 64.35 | 65.88 |
| Bra014447.1-P | Field mustard | cytosol | 64.35 | 65.88 |
| CDX86962 | Canola | cytosol | 41.2 | 64.96 |
| CDY48936 | Canola | cytosol | 65.28 | 64.68 |
| Bra007586.1-P | Field mustard | cytosol | 64.81 | 64.52 |
| PGSC0003DMT400026590 | Potato | cytosol | 61.57 | 62.74 |
| Solyc10g017520.2.1 | Tomato | cytosol | 61.11 | 62.26 |
| Bra039313.1-P | Field mustard | cytosol | 64.35 | 60.7 |
| CDY27358 | Canola | cytosol | 63.89 | 60.0 |
| CDY37066 | Canola | cytosol | 63.43 | 59.83 |
| PGSC0003DMT400000453 | Potato | cytosol | 61.11 | 59.73 |
| CDY18899 | Canola | cytosol | 62.5 | 59.47 |
| Solyc01g094320.2.1 | Tomato | cytosol | 61.11 | 59.19 |
| Bra004939.1-P | Field mustard | cytosol | 62.5 | 58.95 |
| CDX74767 | Canola | cytosol | 62.5 | 58.95 |
| AT2G45800.1 | Thale cress | cytosol | 61.57 | 58.85 |
| KRH15005 | Soybean | cytosol | 51.39 | 58.73 |
| KRG97787 | Soybean | cytosol | 53.24 | 58.08 |
| KRH31081 | Soybean | cytosol | 53.7 | 58.0 |
| Bra000404.1-P | Field mustard | cytosol | 60.65 | 57.96 |
| CDX83389 | Canola | cytosol | 60.65 | 57.96 |
| CDY68273 | Canola | cytosol | 60.65 | 57.96 |
| PGSC0003DMT400055738 | Potato | cytosol | 60.19 | 57.27 |
| Solyc05g049870.2.1 | Tomato | cytosol | 60.19 | 57.02 |
| CDX95666 | Canola | cytosol | 60.19 | 57.02 |
| KRH33303 | Soybean | cytosol | 13.89 | 54.55 |
| KRH05574 | Soybean | cytosol | 45.37 | 50.0 |
| KRG90348 | Soybean | cytosol | 16.67 | 50.0 |
| KRH61425 | Soybean | cytosol | 44.91 | 49.49 |
| KRG88767 | Soybean | cytosol | 44.91 | 49.49 |
| KRH52104 | Soybean | cytosol | 44.91 | 49.49 |
| KRG93772 | Soybean | cytosol | 16.67 | 49.32 |
| KRH59846 | Soybean | cytosol | 50.93 | 49.11 |
| KRH41147 | Soybean | cytosol | 50.46 | 47.81 |
| KRH54438 | Soybean | cytosol | 42.13 | 47.4 |
| KRH35659 | Soybean | cytosol | 38.89 | 46.67 |
| KRH63478 | Soybean | cytosol | 41.2 | 43.63 |
| KRH03352 | Soybean | cytosol | 41.67 | 43.06 |
| KRH57029 | Soybean | cytosol | 41.2 | 41.4 |
| KRH73124 | Soybean | cytosol | 30.56 | 39.29 |
Protein Annotations
| EntrezGene:100779513 | MapMan:15.5.41 | Gene3D:2.10.110.10 | EMBL:ACUP02011467 | EnsemblPlantsGene:GLYMA_18G230400 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0046872 | UniProt:I1N3N3 | InterPro:IPR001781 | EnsemblPlants:KRH00704 | ProteinID:KRH00704 |
| ProteinID:KRH00704.1 | PFAM:PF00412 | ScanProsite:PS00478 | PFscan:PS50023 | PANTHER:PTHR24206 | PANTHER:PTHR24206:SF22 |
| SMART:SM00132 | SUPFAM:SSF57716 | UniParc:UPI000233EC85 | InterPro:Znf_LIM | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr18:-:51918007..51920404
Molecular Weight (calculated)
24459.6 Da
IEP (calculated)
6.684
GRAVY (calculated)
-0.808
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFTGTTDKC KACDKTVYVV DMLTLEGIPY HKNCFRCSHC KGYLTMNTYS SMDGVLYCKP HFEQLFKESG NFSKNFQTAK SSDKQNETNK APNRLSSMFS
101: GTLDKCSVCS KTVYPLEKMT LEGECYHKNC FRCAHAGCHL THSSYAALDG VLYCRHHFQQ LFMEKGNYHH VLQSANHKKN VTPEPAEPAA EGDEEPPKPE
201: ESDSEEHTEE KPQNEA
101: GTLDKCSVCS KTVYPLEKMT LEGECYHKNC FRCAHAGCHL THSSYAALDG VLYCRHHFQQ LFMEKGNYHH VLQSANHKKN VTPEPAEPAA EGDEEPPKPE
201: ESDSEEHTEE KPQNEA
001: MAAFTGTTDK CKACDKTVYV MDLMTLEGMP YHKSCFRCSH CNGTLVICNY SSMDGVLYCK THFEQLFKES GNFSKNFQTA GKTEKSNDAT KAPNRLSSFF
101: SGTQDKCAAC KKTVYPLEKM TMEGESYHKT CFRCAHSGCP LTHSSYAALD GVLYCKVHFS QLFLEKGNYN HVLQAAANHR RSTAEEDKTE PKEDEANPTE
201: EETSDAAAEE HES
101: SGTQDKCAAC KKTVYPLEKM TMEGESYHKT CFRCAHSGCP LTHSSYAALD GVLYCKVHFS QLFLEKGNYN HVLQAAANHR RSTAEEDKTE PKEDEANPTE
201: EETSDAAAEE HES
Arabidopsis Description
PLIM2CLIM domain-containing protein PLIM2c [Source:UniProtKB/Swiss-Prot;Acc:Q500W4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.