Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 6
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05836 | Sorghum | cytosol | 61.69 | 47.5 |
| HORVU6Hr1G060580.5 | Barley | plastid | 62.99 | 47.09 |
| Zm00001d051262_P001 | Maize | cytosol | 62.99 | 46.86 |
| Os12t0510900-01 | Rice | cytosol | 30.52 | 46.53 |
| Os04t0532500-01 | Rice | plasma membrane | 57.79 | 44.28 |
| TraesCS6B01G265100.1 | Wheat | cytosol | 58.44 | 43.48 |
| PGSC0003DMT400014797 | Potato | cytosol | 47.4 | 43.45 |
| TraesCS6A01G236600.1 | Wheat | cytosol | 59.09 | 42.92 |
| TraesCS6D01G219200.1 | Wheat | cytosol | 58.44 | 42.25 |
| GSMUA_Achr1P03020_001 | Banana | cytosol | 47.4 | 41.01 |
| GSMUA_Achr4P29420_001 | Banana | cytosol | 52.6 | 40.3 |
| GSMUA_Achr2P18580_001 | Banana | cytosol | 48.05 | 39.78 |
| Solyc08g007940.2.1 | Tomato | cytosol | 51.95 | 38.84 |
| Solyc08g080740.2.1 | Tomato | cytosol | 48.7 | 38.66 |
| GSMUA_Achr11P... | Banana | cytosol | 50.0 | 38.5 |
| GSMUA_Achr2P11440_001 | Banana | cytosol | 50.0 | 38.5 |
| Os03t0266100-01 | Rice | plasma membrane | 48.7 | 38.27 |
| Zm00001d017382_P001 | Maize | cytosol | 61.04 | 38.06 |
| GSMUA_Achr5P20680_001 | Banana | cytosol | 48.7 | 37.31 |
| VIT_02s0025g03980.t01 | Wine grape | cytosol | 51.95 | 37.21 |
| KRH59846 | Soybean | cytosol | 50.0 | 34.38 |
| KRH41147 | Soybean | cytosol | 50.0 | 33.77 |
| PGSC0003DMT400007915 | Potato | cytosol | 47.4 | 32.74 |
| Os06t0237300-01 | Rice | plasma membrane | 41.56 | 4.91 |
| Os06t0237200-00 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os02t0641000-00 | EnsemblPlantsGene:Os02g0641000 | Gene3D:2.10.110.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 |
| InterPro:IPR001781 | InterPro:Znf_LIM | PANTHER:PTHR24206 | PANTHER:PTHR24206:SF22 | PFAM:PF00412 | PFscan:PS50023 |
| ProteinID:BAS79989.1 | SMART:SM00132 | SUPFAM:SSF57716 | UniParc:UPI000393A5A3 | UniProt:A0A0P0VM79 | MapMan:15.5.41 |
Description
OsPLIM2aZinc finger, LIM-type domain containing protein. (Os02t0641000-00)
Coordinates
chr2:-:25739720..25740833
Molecular Weight (calculated)
16842.9 Da
IEP (calculated)
9.331
GRAVY (calculated)
-0.662
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSCTARRTL SSSSKRRGAS QRNSRKVMLR HSGCRDGRAP SKLSSAFSGT QDKCAACQKT VYPLEKLTLE GESYHKSCFK CSHGGCILTT SSYAALNGIL
101: YCKIHFSQLF KEKGSYNHLI QTAQSKQKES EEAAPVAATE ASEKEQEVPP QDAT
101: YCKIHFSQLF KEKGSYNHLI QTAQSKQKES EEAAPVAATE ASEKEQEVPP QDAT
001: MAAFTGTTDK CKACDKTVYV MDLMTLEGMP YHKSCFRCSH CNGTLVICNY SSMDGVLYCK THFEQLFKES GNFSKNFQTA GKTEKSNDAT KAPNRLSSFF
101: SGTQDKCAAC KKTVYPLEKM TMEGESYHKT CFRCAHSGCP LTHSSYAALD GVLYCKVHFS QLFLEKGNYN HVLQAAANHR RSTAEEDKTE PKEDEANPTE
201: EETSDAAAEE HES
101: SGTQDKCAAC KKTVYPLEKM TMEGESYHKT CFRCAHSGCP LTHSSYAALD GVLYCKVHFS QLFLEKGNYN HVLQAAANHR RSTAEEDKTE PKEDEANPTE
201: EETSDAAAEE HES
Arabidopsis Description
PLIM2CLIM domain-containing protein PLIM2c [Source:UniProtKB/Swiss-Prot;Acc:Q500W4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.