Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G247800.1 | Wheat | cytosol | 99.41 | 99.41 |
| TraesCS7B01G143700.1 | Wheat | mitochondrion | 95.29 | 70.74 |
| HORVU7Hr1G050980.1 | Barley | mitochondrion | 92.94 | 68.1 |
| Os08t0511400-01 | Rice | cytosol | 65.88 | 64.74 |
| Zm00001d052898_P001 | Maize | plastid | 54.71 | 58.86 |
| EES14260 | Sorghum | cytosol | 60.59 | 58.86 |
| Zm00001d031464_P001 | Maize | plastid | 55.29 | 57.67 |
| Solyc01g112260.2.1 | Tomato | nucleus, plastid | 36.47 | 41.06 |
| GSMUA_Achr4P21850_001 | Banana | nucleus | 38.24 | 39.16 |
| TraesCS6D01G260100.1 | Wheat | nucleus | 39.41 | 37.02 |
| KRH74108 | Soybean | plastid | 31.76 | 36.73 |
| AT4G35320.1 | Thale cress | plastid | 31.18 | 36.05 |
| CDX75494 | Canola | plastid | 28.82 | 34.75 |
| Bra011606.1-P | Field mustard | plastid | 28.82 | 34.75 |
| CDX69130 | Canola | plastid | 28.82 | 34.27 |
| AT2G17300.1 | Thale cress | mitochondrion, plastid | 27.65 | 33.81 |
| KRH14006 | Soybean | cytosol, plastid | 24.12 | 32.8 |
| GSMUA_Achr4P18190_001 | Banana | plastid | 39.41 | 31.46 |
| VIT_03s0038g03980.t01 | Wine grape | plastid | 38.82 | 31.13 |
| CDY66481 | Canola | plastid | 24.71 | 29.37 |
| CDY52604 | Canola | plastid | 24.71 | 29.37 |
| CDX95195 | Canola | plastid | 24.71 | 29.37 |
| Bra002049.1-P | Field mustard | plastid | 24.71 | 29.37 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G246500.1 | EnsemblPlantsGene:TraesCS7D01G246500 | PANTHER:PTHR35714 | PANTHER:PTHR35714:SF2 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr7D:-:215332487..215333356
Molecular Weight (calculated)
18629.3 Da
IEP (calculated)
10.906
GRAVY (calculated)
-0.348
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MATDAILETI KPRRSPWLED LPVTNGGAAK GGKVDLSGMR RRVSSSLSLS LQPLSSSSSA AFRRARSMPS IKALAAAGAV RQWWEWGLGW VMTRKPSFAR
101: GLKMSEDEAA LLGCHCRGTL RHVFYKARAE VRRLLGRDGR PLGGVAAQDF RYDSVSYAQN FDNGDVDARC
101: GLKMSEDEAA LLGCHCRGTL RHVFYKARAE VRRLLGRDGR PLGGVAAQDF RYDSVSYAQN FDNGDVDARC
001: MSSMMETLQI RKPTSLPVSQ RPNAAATADD EPGLIRRRLS SLSLNLSNQP AAIAARFPRS KSVSAMGEQA GSSVKEWWEW GWSWILSRKP IFIRDLELNK
101: DEAKSIGSQN RGSIMHVFFK LRSQIRNFMG PSSEDSLPLS CKYKRQR
101: DEAKSIGSQN RGSIMHVFFK LRSQIRNFMG PSSEDSLPLS CKYKRQR
Arabidopsis Description
AT4g35320/F23E12_120 [Source:UniProtKB/TrEMBL;Acc:Q9ASZ6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.