Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031464_P001 | Maize | plastid | 75.95 | 73.62 |
| EES14260 | Sorghum | cytosol | 81.01 | 73.14 |
| Os08t0511400-01 | Rice | cytosol | 62.03 | 56.65 |
| TraesCS7D01G246500.1 | Wheat | cytosol, plastid | 58.86 | 54.71 |
| TraesCS7A01G247800.1 | Wheat | cytosol | 58.86 | 54.71 |
| TraesCS7B01G143700.1 | Wheat | mitochondrion | 56.33 | 38.86 |
| HORVU7Hr1G050980.1 | Barley | mitochondrion | 55.7 | 37.93 |
| GSMUA_Achr4P21850_001 | Banana | nucleus | 33.54 | 31.93 |
| AT4G35320.1 | Thale cress | plastid | 27.22 | 29.25 |
| Solyc01g112260.2.1 | Tomato | nucleus, plastid | 27.85 | 29.14 |
| CDX75494 | Canola | plastid | 23.42 | 26.24 |
| Bra011606.1-P | Field mustard | plastid | 23.42 | 26.24 |
| CDX69130 | Canola | plastid | 23.42 | 25.87 |
| KRH74108 | Soybean | plastid | 24.05 | 25.85 |
| Zm00001d017837_P001 | Maize | nucleus | 31.01 | 25.65 |
| CDY52604 | Canola | plastid | 22.15 | 24.48 |
| Bra002049.1-P | Field mustard | plastid | 22.15 | 24.48 |
| AT2G17300.1 | Thale cress | mitochondrion, plastid | 21.52 | 24.46 |
| GSMUA_Achr4P18190_001 | Banana | plastid | 32.28 | 23.94 |
| CDY66481 | Canola | plastid | 21.52 | 23.78 |
| CDX95195 | Canola | plastid | 21.52 | 23.78 |
| VIT_03s0038g03980.t01 | Wine grape | plastid | 31.65 | 23.58 |
| KRH14006 | Soybean | cytosol, plastid | 17.72 | 22.4 |
Protein Annotations
| EnsemblPlants:Zm00001d052898_P001 | EnsemblPlants:Zm00001d052898_T001 | EnsemblPlantsGene:Zm00001d052898 | EntrezGene:100277899 | PANTHER:PTHR35714 | PANTHER:PTHR35714:SF2 |
| ProteinID:AQK58313.1 | SEG:seg | UniParc:UPI000221152C | UniProt:K7UNL1 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr4:-:204030126..204030602
Molecular Weight (calculated)
16924.1 Da
IEP (calculated)
11.402
GRAVY (calculated)
-0.425
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MATDAILETI KPRRSEEQLP VTTAAAAGTR LRRRVSSFSA HVRPPPGLSS SAAAAFRRAR SMPTAKALAA AGALRRWWEW VTAPFAPRGD DDDEARPLGG
101: CRCACAGGPG GWRHVLVRLR AGARRLLGRD GRPLKAAAPP DFGYDSVSYA RNFDDGEA
101: CRCACAGGPG GWRHVLVRLR AGARRLLGRD GRPLKAAAPP DFGYDSVSYA RNFDDGEA
001: MSSMMETLQI RKPTSLPVSQ RPNAAATADD EPGLIRRRLS SLSLNLSNQP AAIAARFPRS KSVSAMGEQA GSSVKEWWEW GWSWILSRKP IFIRDLELNK
101: DEAKSIGSQN RGSIMHVFFK LRSQIRNFMG PSSEDSLPLS CKYKRQR
101: DEAKSIGSQN RGSIMHVFFK LRSQIRNFMG PSSEDSLPLS CKYKRQR
Arabidopsis Description
AT4g35320/F23E12_120 [Source:UniProtKB/TrEMBL;Acc:Q9ASZ6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.