Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plastid 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07366 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 90.05 | 90.53 |
| Os02t0715300-01 | Rice | cytosol, mitochondrion, nucleus | 73.82 | 77.05 |
| TraesCS6B01G308500.1 | Wheat | nucleus | 73.82 | 76.22 |
| TraesCS6A01G279700.1 | Wheat | nucleus | 73.82 | 76.22 |
| HORVU6Hr1G070290.1 | Barley | nucleus | 71.2 | 73.51 |
| TraesCS6D01G260100.1 | Wheat | nucleus | 68.59 | 72.38 |
| HORVU1Hr1G062730.1 | Barley | cytosol | 42.93 | 71.3 |
| GSMUA_Achr4P21850_001 | Banana | nucleus | 46.6 | 53.61 |
| Solyc01g112260.2.1 | Tomato | nucleus, plastid | 32.98 | 41.72 |
| GSMUA_Achr4P18190_001 | Banana | plastid | 45.55 | 40.85 |
| KRH14006 | Soybean | cytosol, plastid | 26.18 | 40.0 |
| AT2G17300.1 | Thale cress | mitochondrion, plastid | 27.75 | 38.13 |
| CDX75494 | Canola | plastid | 27.75 | 37.59 |
| Bra011606.1-P | Field mustard | plastid | 27.75 | 37.59 |
| KRH74108 | Soybean | plastid | 28.8 | 37.41 |
| CDX69130 | Canola | plastid | 27.23 | 36.36 |
| AT4G35320.1 | Thale cress | plastid | 26.18 | 34.01 |
| VIT_03s0038g03980.t01 | Wine grape | plastid | 37.7 | 33.96 |
| CDY66481 | Canola | plastid | 25.13 | 33.57 |
| CDY52604 | Canola | plastid | 25.13 | 33.57 |
| CDX95195 | Canola | plastid | 25.13 | 33.57 |
| Bra002049.1-P | Field mustard | plastid | 25.13 | 33.57 |
| Zm00001d031464_P001 | Maize | plastid | 27.75 | 32.52 |
| Zm00001d052898_P001 | Maize | plastid | 25.65 | 31.01 |
Protein Annotations
| EMBL:BT040711 | EnsemblPlants:Zm00001d017837_P001 | EnsemblPlants:Zm00001d017837_T001 | EnsemblPlantsGene:Zm00001d017837 | EntrezGene:100278506 | PANTHER:PTHR35714 |
| PANTHER:PTHR35714:SF1 | ProteinID:AQK74217.1 | SEG:seg | UniParc:UPI00017B7614 | UniProt:B4FUC3 | MapMan:35.2 |
Description
No Description!
Coordinates
chr5:+:208273343..208273918
Molecular Weight (calculated)
20761.8 Da
IEP (calculated)
11.477
GRAVY (calculated)
-0.399
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MATILENIQK ARFLPTRPLK DELPTFQGGG KSKEESHLMG LRKRLSSFSG KIQPISSASA AEWAFRRSKS APSLGAAFAA GGGSLRQWWQ WGVGWLLSKK
101: PGFAGDLEMN EEEVAALGRQ SRGTWAHILF KMRSGVRRLV ASAHSLPTTH KQQSLPSSSA AAAHSVQCKP AASFAYAQRQ SFHHTGHAMA H
101: PGFAGDLEMN EEEVAALGRQ SRGTWAHILF KMRSGVRRLV ASAHSLPTTH KQQSLPSSSA AAAHSVQCKP AASFAYAQRQ SFHHTGHAMA H
001: MSSMMETLQI RKPTSLPVSQ RPNAAATADD EPGLIRRRLS SLSLNLSNQP AAIAARFPRS KSVSAMGEQA GSSVKEWWEW GWSWILSRKP IFIRDLELNK
101: DEAKSIGSQN RGSIMHVFFK LRSQIRNFMG PSSEDSLPLS CKYKRQR
101: DEAKSIGSQN RGSIMHVFFK LRSQIRNFMG PSSEDSLPLS CKYKRQR
Arabidopsis Description
AT4g35320/F23E12_120 [Source:UniProtKB/TrEMBL;Acc:Q9ASZ6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.