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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • peroxisome 1
  • mitochondrion 3
  • plastid 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES07366 Sorghum cytosol, mitochondrion, nucleus, plastid 78.69 75.79
TraesCS6D01G260100.1 Wheat nucleus 74.32 75.14
HORVU1Hr1G062730.1 Barley cytosol 46.99 74.78
TraesCS6A01G279700.1 Wheat nucleus 75.41 74.59
TraesCS6B01G308500.1 Wheat nucleus 74.86 74.05
Zm00001d017837_P001 Maize nucleus 77.05 73.82
HORVU6Hr1G070290.1 Barley nucleus 73.22 72.43
GSMUA_Achr4P21850_001 Banana nucleus 50.27 55.42
GSMUA_Achr4P18190_001 Banana plastid 50.82 43.66
Solyc01g112260.2.1 Tomato nucleus, plastid 35.52 43.05
Os08t0511400-01 Rice cytosol 39.89 42.2
KRH14006 Soybean cytosol, plastid 27.87 40.8
KRH74108 Soybean plastid 30.05 37.41
AT2G17300.1 Thale cress mitochondrion, plastid 27.32 35.97
CDX75494 Canola plastid 27.32 35.46
Bra011606.1-P Field mustard plastid 27.32 35.46
VIT_03s0038g03980.t01 Wine grape plastid 40.44 34.91
CDX69130 Canola plastid 26.78 34.27
AT4G35320.1 Thale cress plastid 26.78 33.33
CDY66481 Canola plastid 25.14 32.17
CDX95195 Canola plastid 25.14 32.17
CDY52604 Canola plastid 24.59 31.47
Bra002049.1-P Field mustard plastid 24.59 31.47
Protein Annotations
EMBL:AK059816EnsemblPlants:Os02t0715300-01EnsemblPlantsGene:Os02g0715300EntrezGene:4330520PANTHER:PTHR35714PANTHER:PTHR35714:SF1
ProteinID:BAD09167.1ProteinID:BAF09839.1ProteinID:BAS80606.1ProteinID:EAZ24386.1RefSeq:XP_015626789.1SEG:seg
UniParc:UPI000023AD3AUniProt:Q6ZHP7MapMan:35.2:::
Description
Conserved hypothetical protein. (Os02t0715300-01);Conserved hypothetical protein. (Os02t0715300-02)
Coordinates
chr2:+:29676022..29677029
Molecular Weight (calculated)
19643.4 Da
IEP (calculated)
11.026
GRAVY (calculated)
-0.410
Length
183 amino acids
Sequence
(BLAST)
001: MATILENIQK ARFLPTRPLK DELPTFQGGG GGGGGGGGKE SHLMGLRKRL SSFSDKIQPI SSASAEWAFR RSKSAPSLGA FAGGPLKRWW DWGVGWLMSK
101: KPGFATDLEM NEEEVAALGR GSRGSWGHIL YKMRSGVRRL VTSHSLPTTH RAAAAASASA QCKPAATFNY TQSFHSGQTA MAY
Best Arabidopsis Sequence Match ( AT4G35320.1 )
(BLAST)
001: MSSMMETLQI RKPTSLPVSQ RPNAAATADD EPGLIRRRLS SLSLNLSNQP AAIAARFPRS KSVSAMGEQA GSSVKEWWEW GWSWILSRKP IFIRDLELNK
101: DEAKSIGSQN RGSIMHVFFK LRSQIRNFMG PSSEDSLPLS CKYKRQR
Arabidopsis Description
AT4g35320/F23E12_120 [Source:UniProtKB/TrEMBL;Acc:Q9ASZ6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.