Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017837_P001 | Maize | nucleus | 90.53 | 90.05 |
| Os02t0715300-01 | Rice | cytosol, mitochondrion, nucleus | 75.79 | 78.69 |
| TraesCS6A01G279700.1 | Wheat | nucleus | 73.68 | 75.68 |
| TraesCS6B01G308500.1 | Wheat | nucleus | 72.11 | 74.05 |
| HORVU6Hr1G070290.1 | Barley | nucleus | 71.58 | 73.51 |
| HORVU1Hr1G062730.1 | Barley | cytosol | 43.68 | 72.17 |
| TraesCS6D01G260100.1 | Wheat | nucleus | 68.42 | 71.82 |
| GSMUA_Achr4P21850_001 | Banana | nucleus | 46.84 | 53.61 |
| Solyc01g112260.2.1 | Tomato | nucleus, plastid | 33.16 | 41.72 |
| GSMUA_Achr4P18190_001 | Banana | plastid | 46.32 | 41.31 |
| KRH14006 | Soybean | cytosol, plastid | 26.32 | 40.0 |
| AT2G17300.1 | Thale cress | mitochondrion, plastid | 27.89 | 38.13 |
| CDX75494 | Canola | plastid | 27.89 | 37.59 |
| Bra011606.1-P | Field mustard | plastid | 27.89 | 37.59 |
| KRH74108 | Soybean | plastid | 28.95 | 37.41 |
| CDX69130 | Canola | plastid | 27.37 | 36.36 |
| VIT_03s0038g03980.t01 | Wine grape | plastid | 38.42 | 34.43 |
| AT4G35320.1 | Thale cress | plastid | 26.32 | 34.01 |
| CDY66481 | Canola | plastid | 24.74 | 32.87 |
| CDX95195 | Canola | plastid | 24.74 | 32.87 |
| CDY52604 | Canola | plastid | 24.21 | 32.17 |
| Bra002049.1-P | Field mustard | plastid | 24.21 | 32.17 |
| EES14260 | Sorghum | cytosol | 27.89 | 30.29 |
Protein Annotations
| EnsemblPlants:EES07366 | EnsemblPlantsGene:SORBI_3004G261200 | EntrezGene:8071783 | PANTHER:PTHR35714 | PANTHER:PTHR35714:SF1 | ProteinID:EES07366 |
| ProteinID:EES07366.1 | RefSeq:XP_002454390.1 | SEG:seg | unigene:Sbi.1969 | UniParc:UPI0001A85CA1 | UniProt:C5XZW5 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:60658307..60659506
Molecular Weight (calculated)
20708.7 Da
IEP (calculated)
11.299
GRAVY (calculated)
-0.438
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MATILENIQK ARFLPTRPLK DELPTFQGGG GGKEESHLMG LRKRLSSFSG KIQPISSASA EWAFRRSKSA PSLGAAFAAG GGSLRQWWQW GVGWLLSKKP
101: GFAGDLEMNE EEVAALGRQS RGSWGHILYK MRSGVRRLVM STHSLPTTHK QSSLPSSASA VHNNVQCKPA AAFAYAQRQS FHHTGHAMAH
101: GFAGDLEMNE EEVAALGRQS RGSWGHILYK MRSGVRRLVM STHSLPTTHK QSSLPSSASA VHNNVQCKPA AAFAYAQRQS FHHTGHAMAH
001: MSSMMETLQI RKPTSLPVSQ RPNAAATADD EPGLIRRRLS SLSLNLSNQP AAIAARFPRS KSVSAMGEQA GSSVKEWWEW GWSWILSRKP IFIRDLELNK
101: DEAKSIGSQN RGSIMHVFFK LRSQIRNFMG PSSEDSLPLS CKYKRQR
101: DEAKSIGSQN RGSIMHVFFK LRSQIRNFMG PSSEDSLPLS CKYKRQR
Arabidopsis Description
AT4g35320/F23E12_120 [Source:UniProtKB/TrEMBL;Acc:Q9ASZ6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.