Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0001g09700.t01 | Wine grape | nucleus | 60.33 | 60.33 |
| GSMUA_Achr9P22610_001 | Banana | cytosol, nucleus, plastid | 44.02 | 49.69 |
| TraesCS3A01G055700.1 | Wheat | nucleus | 37.5 | 31.8 |
| TraesCS3B01G068100.1 | Wheat | nucleus | 36.96 | 31.05 |
| VIT_12s0057g00720.t01 | Wine grape | cytosol | 27.17 | 29.41 |
| Zm00001d016973_P001 | Maize | nucleus | 35.87 | 27.97 |
| OQU85206 | Sorghum | nucleus, plastid | 35.33 | 24.34 |
| Zm00001d050903_P001 | Maize | cytosol | 37.5 | 18.06 |
Protein Annotations
| Gene3D:1.20.1280.50 | EntrezGene:100245654 | wikigene:100245654 | MapMan:11.6.2.3 | MapMan:19.2.2.8.1.4.1 | MapMan:19.2.2.8.1.4.6 |
| ProteinID:CCB57796 | ProteinID:CCB57796.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | UniProt:F6HSY6 | EMBL:FN596246 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001810 | EntrezGene:LOC100245654 | wikigene:LOC100245654 |
| PFAM:PF00646 | PFscan:PS50181 | PANTHER:PTHR12874 | PANTHER:PTHR12874:SF10 | SMART:SM00256 | SUPFAM:SSF81383 |
| UniParc:UPI00021093BA | ArrayExpress:VIT_07s0129g01000 | EnsemblPlantsGene:VIT_07s0129g01000 | EnsemblPlants:VIT_07s0129g01000.t01 | unigene:Vvi.20073 | RefSeq:XP_003632510 |
| RefSeq:XP_003632510.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7:+:16134715..16135491
Molecular Weight (calculated)
20380.3 Da
IEP (calculated)
9.392
GRAVY (calculated)
-0.480
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRGLDCGET PAGGVGKRQR RQVEGGEEDG EMMAETAFVN LDEDLLFEVL KHVDARTLAT AACVSRQWKR TAHDERLWEM ICTRHWANVG CGTQQLRSVV
101: LALGGFRRLH ALCLWPLLKS PPSSSSSPSP YTTSSHSPQS SPFSPPVVPS KKAPTRWGKD EVHLSLSLLS IRFYEKMSSK SKGS
101: LALGGFRRLH ALCLWPLLKS PPSSSSSPSP YTTSSHSPQS SPFSPPVVPS KKAPTRWGKD EVHLSLSLLS IRFYEKMSSK SKGS
001: MKRSTTDSDL AGDAHNETNK KMKSTEEEEI GFSNLDENLV YEVLKHVDAK TLAMSSCVSK IWHKTAQDER LWELICTRHW TNIGCGQNQL RSVVLALGGF
101: RRLHSLYLWP LSKPNPRARF GKDELKLTLS LLSIRYYEKM SFTKRPLPES K
101: RRLHSLYLWP LSKPNPRARF GKDELKLTLS LLSIRYYEKM SFTKRPLPES K
Arabidopsis Description
GID2SLY1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5B2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.