Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0154g00220.t01 | Wine grape | cytosol | 30.41 | 18.18 |
| VIT_06s0004g06240.t01 | Wine grape | plastid | 33.92 | 17.42 |
| VIT_19s0014g05000.t01 | Wine grape | cytosol, plastid | 38.01 | 15.15 |
| VIT_00s1356g00010.t01 | Wine grape | cytosol | 33.92 | 15.03 |
| VIT_18s0001g14130.t01 | Wine grape | vacuole | 35.67 | 14.56 |
| VIT_19s0090g01730.t01 | Wine grape | cytosol | 12.87 | 11.7 |
| VIT_18s0001g03670.t01 | Wine grape | nucleus | 31.58 | 11.04 |
| VIT_18s0001g02000.t01 | Wine grape | nucleus, plastid | 18.13 | 9.2 |
| GSMUA_Achr7P19590_001 | Banana | cytosol | 0.58 | 1.16 |
Protein Annotations
| ArrayExpress:VIT_08s0040g02390 | EMBL:FN596008 | EnsemblPlants:VIT_08s0040g02390.t01 | EnsemblPlantsGene:VIT_08s0040g02390 | Gene3D:3.90.228.10 | PANTHER:PTHR31681 |
| ProteinID:CCB57043 | ProteinID:CCB57043.1 | SUPFAM:SSF56399 | UniParc:UPI0002108B57 | UniProt:F6HQZ4 | MapMan:15.5.15 |
Description
No Description!
Coordinates
chr8:-:13461273..13461788
Molecular Weight (calculated)
18168.3 Da
IEP (calculated)
8.842
GRAVY (calculated)
0.148
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKSKAKENS VGLGLERLVA DGNELLLFHG VVITCALGSD KGALGICSKK RCGVCRVIGS NFFVREDTAR TTTSLCGNSW RAHEKVATEC IANGVSPATR
101: KGIILCKVIA GRVVRAPKFG LMDGEKGGFD SVVSSTGDQP DGSQDLMVLN PRAILPCFVI IYNVCKGTMF Q
101: KGIILCKVIA GRVVRAPKFG LMDGEKGGFD SVVSSTGDQP DGSQDLMVLN PRAILPCFVI IYNVCKGTMF Q
001: MEDSSKKSQK KKKNKSKNNI PTVWFSLKKS LHCKSEPSDV HDPISTTKQQ QHLSTISTKK ISGISSGGAA VCGGGLSGCS RSIANLKDVI HGSKRHFEKP
101: PISSPRSIGS NEFLNPITHE VILSNSTCEL KITGVGDMAS PVGAADSGGG GGGGNGRSTT YVGMLRPGTP MHYLNHSASY RSQTRKGSFA LSERDRGGGG
201: GGEGLGFHTN RRVSLEMNRE STINGGNNSS VSCHKCGEQF NKLEAAEAHH LSKHAVTELV EGDSSRKIVE IICRTSWLKS ENQCGRIDRV LKVHNMQKTL
301: ARFEEYRETV KIRASKLQKK HPRCLADGNE LLRFHGTTVA CGLGINGSTS VCTAEKCCVC RIIRNGFSSK REKNNGVGVF TASTSGRAFE SILVNGGDES
401: GDVDRTVRKV LIVCRVIAGR VHRPVENVEE MNGLMSGFDS LAGKVGLYTN VEELYLLNPK ALLPCFVVIC KP
101: PISSPRSIGS NEFLNPITHE VILSNSTCEL KITGVGDMAS PVGAADSGGG GGGGNGRSTT YVGMLRPGTP MHYLNHSASY RSQTRKGSFA LSERDRGGGG
201: GGEGLGFHTN RRVSLEMNRE STINGGNNSS VSCHKCGEQF NKLEAAEAHH LSKHAVTELV EGDSSRKIVE IICRTSWLKS ENQCGRIDRV LKVHNMQKTL
301: ARFEEYRETV KIRASKLQKK HPRCLADGNE LLRFHGTTVA CGLGINGSTS VCTAEKCCVC RIIRNGFSSK REKNNGVGVF TASTSGRAFE SILVNGGDES
401: GDVDRTVRKV LIVCRVIAGR VHRPVENVEE MNGLMSGFDS LAGKVGLYTN VEELYLLNPK ALLPCFVVIC KP
Arabidopsis Description
AT5g54630/MRB17_13 [Source:UniProtKB/TrEMBL;Acc:Q9FIU1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.