Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH73867 | Soybean | cytosol | 25.53 | 31.79 |
| KRH14275 | Soybean | cytosol | 36.17 | 25.47 |
| VIT_02s0154g00220.t01 | Wine grape | cytosol | 27.66 | 18.18 |
| VIT_00s1356g00010.t01 | Wine grape | cytosol | 36.7 | 17.88 |
| VIT_19s0014g05000.t01 | Wine grape | cytosol, plastid | 37.77 | 16.55 |
| VIT_06s0004g06240.t01 | Wine grape | plastid | 27.13 | 15.32 |
| VIT_18s0001g14130.t01 | Wine grape | vacuole | 33.51 | 15.04 |
| VIT_18s0001g02000.t01 | Wine grape | nucleus, plastid | 26.6 | 14.84 |
| VIT_08s0040g02390.t01 | Wine grape | plasma membrane | 11.7 | 12.87 |
| VIT_18s0001g03670.t01 | Wine grape | nucleus | 32.98 | 12.68 |
Protein Annotations
| ArrayExpress:VIT_19s0090g01730 | EMBL:AM435049 | EMBL:FN595751 | EnsemblPlants:VIT_19s0090g01730.t01 | EnsemblPlantsGene:VIT_19s0090g01730 | PANTHER:PTHR31681 |
| ProteinID:CAN78296 | ProteinID:CAN78296.1 | ProteinID:CCB50727 | ProteinID:CCB50727.1 | UniParc:UPI000210A714 | UniProt:F6HER5 |
| MapMan:15.5.15 | : | : | : | : | : |
Description
No Description!
Coordinates
chr19:+:7769564..7771880
Molecular Weight (calculated)
22351.8 Da
IEP (calculated)
8.464
GRAVY (calculated)
-0.702
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAMWVYLKD KVDCRSKLSD VVYWPEKVVK DRSSALKQED SSGEEPFQVE SPVTPVHQVI FHRNYIRKRY YELSVEDSSR NVIEMIFRAA ATSPSRDSRK
101: IERILRVKHS SEILERFEKY REMIKKKAYE QHKRHPRCVV DGNELLQFYG TQMNCCSQKL NRVIELCKDF TCQVCRIIQS ELEDYTPS
101: IERILRVKHS SEILERFEKY REMIKKKAYE QHKRHPRCVV DGNELLQFYG TQMNCCSQKL NRVIELCKDF TCQVCRIIQS ELEDYTPS
001: MEASSTRSEK KKKKKTIQRE NTDTQKKKKL PSVWFSLKKS LPCKSDVSDV HIPRSKKELA PISTKRTTTS SGGGVGGRSG CSRSIANLKD VIHGNQRHLE
101: KPLCSSPRSI GSSEFLNPIT HDVIFSNSTC ELKITAAGAT EFVGNLRPGT PVNYSSSRRS QTSRKASSLD REGLGFHQSR RENDREAAIN GDNSSVSCHK
201: CGEKFSKLEA AEAHHLTKHA VTELMEGDSS RRIVEIICRT SWLKTENQGG RIDRILKVHN MQKTLARFEE YRDTVKIRAS KLQKKHPRCI ADGNELLRFH
301: GTTVACALGI NGSTSLCSSE KCCVCRIIRN GFSAKREMNN GIGVFTASTS ERAFESIVIG DGGGGDRKAL IVCRVIAGRV HRPVENVEEM GGLLSGFDSL
401: AGNGVVARNK GMEVEERQIQ RLCFTGGEYW
101: KPLCSSPRSI GSSEFLNPIT HDVIFSNSTC ELKITAAGAT EFVGNLRPGT PVNYSSSRRS QTSRKASSLD REGLGFHQSR RENDREAAIN GDNSSVSCHK
201: CGEKFSKLEA AEAHHLTKHA VTELMEGDSS RRIVEIICRT SWLKTENQGG RIDRILKVHN MQKTLARFEE YRDTVKIRAS KLQKKHPRCI ADGNELLRFH
301: GTTVACALGI NGSTSLCSSE KCCVCRIIRN GFSAKREMNN GIGVFTASTS ERAFESIVIG DGGGGDRKAL IVCRVIAGRV HRPVENVEEM GGLLSGFDSL
401: AGNGVVARNK GMEVEERQIQ RLCFTGGEYW
Arabidopsis Description
At4g27240 [Source:UniProtKB/TrEMBL;Acc:O81827]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.