Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27010 | Soybean | endoplasmic reticulum, mitochondrion | 62.68 | 62.87 |
| PGSC0003DMT400004311 | Potato | cytosol | 20.41 | 62.5 |
| PGSC0003DMT400004315 | Potato | mitochondrion | 59.48 | 61.26 |
| Solyc01g088490.2.1 | Tomato | mitochondrion | 59.18 | 60.96 |
| KRH22320 | Soybean | extracellular, plasma membrane | 47.81 | 60.74 |
| AT1G06270.1 | Thale cress | mitochondrion | 58.02 | 58.02 |
| CDY10189 | Canola | mitochondrion | 55.98 | 56.3 |
| Bra015488.1-P | Field mustard | mitochondrion | 55.98 | 56.14 |
| CDY57815 | Canola | mitochondrion | 55.98 | 56.14 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:100259255 | wikigene:100259255 | MapMan:35.1 | ProteinID:CBI21940 | ProteinID:CBI21940.3 |
| UniProt:E0CTM4 | EMBL:FN595235 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009451 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0043231 | GO:GO:0090305 | InterPro:IPR011990 | EntrezGene:LOC100259255 | wikigene:LOC100259255 |
| PANTHER:PTHR24015 | PANTHER:PTHR24015:SF925 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI00015C953A | ArrayExpress:VIT_12s0028g02610 | EnsemblPlantsGene:VIT_12s0028g02610 |
| EnsemblPlants:VIT_12s0028g02610.t01 | RefSeq:XP_002278909 | RefSeq:XP_002278909.1 | RefSeq:XP_019078782.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr12:-:3376397..3379249
Molecular Weight (calculated)
37913.5 Da
IEP (calculated)
8.203
GRAVY (calculated)
0.209
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIGATKLCR SLFHFHYSLR QISSIHSITS SQTLEESIKA AVESKTYQKI PDLLISLEET CLNPNPFSFL STFSQNLRTQ VVDEILQSFI PLRPRSRPQI
101: AYACLLSFTL QSANPLPLAL AILQRTLRSG CIPVPQTHLL LSSAWLSRRR QSHSVSNILS EMQSIGYYPD CGTCNYLILS LCAIDQLVEA VIVLKSMGQV
201: GCIPDLEGYG SVIGAMCAMR RTTDATELMK EMVAKIGLTP RQGTVLNLVA ALRAKKEIWK AVEMIEFLEG EDFNAGFASY ESVLEGCLAC HEFVLAGKVV
301: MGMTARGFIP YIGVRQKVVE GLANLGEWKL ALAVRQRFAD LRS
101: AYACLLSFTL QSANPLPLAL AILQRTLRSG CIPVPQTHLL LSSAWLSRRR QSHSVSNILS EMQSIGYYPD CGTCNYLILS LCAIDQLVEA VIVLKSMGQV
201: GCIPDLEGYG SVIGAMCAMR RTTDATELMK EMVAKIGLTP RQGTVLNLVA ALRAKKEIWK AVEMIEFLEG EDFNAGFASY ESVLEGCLAC HEFVLAGKVV
301: MGMTARGFIP YIGVRQKVVE GLANLGEWKL ALAVRQRFAD LRS
001: MAIRLTHLRK PLAYSRSFDV CIPFFRSISS FEAVEKAIKC AVETKEYLRI PELVVSLKEP YQNSTLFSFL SAFQRHHRIR VIDEILQSFV PVRPRSLPKI
101: VYSSLLTYCL QSSDPLPLSF AILQRTLRSG CLPNPQTHLL LSDAWLERRR GSQSVADIIN EMKLIGYSPD TGTCNYLVSS LCAVDKLDEA IKVVEEMSAA
201: GCIPDVESYG AVINSLCLAR KTTDVVKIVK EMVSKAGISP RKGMLTKVAA ALRANREIWK AIEMIEFVES RDYPVEFESY EVVVEGCLEV REYILAGKVV
301: MRMTDRGFIP YIKVRQKVVE RLINIGEWKL ACTVRQRVSE LRS
101: VYSSLLTYCL QSSDPLPLSF AILQRTLRSG CLPNPQTHLL LSDAWLERRR GSQSVADIIN EMKLIGYSPD TGTCNYLVSS LCAVDKLDEA IKVVEEMSAA
201: GCIPDVESYG AVINSLCLAR KTTDVVKIVK EMVSKAGISP RKGMLTKVAA ALRANREIWK AIEMIEFVES RDYPVEFESY EVVVEGCLEV REYILAGKVV
301: MRMTDRGFIP YIKVRQKVVE RLINIGEWKL ACTVRQRVSE LRS
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g06270 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNC0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.