Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 4
- peroxisome 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92905 | Soybean | cytosol | 68.13 | 74.7 |
| GSMUA_Achr7P03750_001 | Banana | cytosol | 68.13 | 71.26 |
| VIT_05s0077g02320.t01 | Wine grape | cytosol | 71.43 | 67.01 |
| GSMUA_Achr3P24030_001 | Banana | cytosol | 70.33 | 65.31 |
| GSMUA_Achr8P22530_001 | Banana | cytosol | 69.23 | 62.38 |
| KRH33884 | Soybean | cytosol | 47.25 | 62.32 |
| Zm00001d050935_P001 | Maize | cytosol | 64.84 | 59.6 |
| TraesCS2A01G440800.1 | Wheat | cytosol, mitochondrion, plastid | 63.74 | 58.59 |
| TraesCS2D01G438000.1 | Wheat | cytosol | 63.74 | 58.59 |
| TraesCS2B01G460200.1 | Wheat | cytosol | 62.64 | 57.58 |
| Os02t0592400-01 | Rice | cytosol | 62.64 | 53.27 |
| EES05347 | Sorghum | cytosol | 63.74 | 53.21 |
| Zm00001d017060_P001 | Maize | cytosol | 64.84 | 53.15 |
| HORVU7Hr1G087030.1 | Barley | extracellular | 32.97 | 50.85 |
| VIT_13s0067g02300.t01 | Wine grape | plastid | 40.66 | 46.84 |
| HORVU2Hr1G102130.5 | Barley | cytosol | 48.35 | 36.67 |
Protein Annotations
| EntrezGene:100244157 | wikigene:100244157 | MapMan:35.2 | ProteinID:CCB61855 | ProteinID:CCB61855.1 | UniProt:F6I4L8 |
| EMBL:FN596746 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0031305 |
| GO:GO:0033617 | GO:GO:0097249 | InterPro:Hypoxia_induced_domain | InterPro:IPR007667 | EntrezGene:LOC100244157 | wikigene:LOC100244157 |
| PFAM:PF04588 | PFscan:PS51503 | PANTHER:PTHR28018 | PANTHER:PTHR28018:SF2 | TIGR:TC65551 | TMHMM:TMhelix |
| UniParc:UPI00015C95F0 | ArrayExpress:VIT_14s0060g02300 | EnsemblPlantsGene:VIT_14s0060g02300 | EnsemblPlants:VIT_14s0060g02300.t01 | unigene:Vvi.12738 | RefSeq:XP_002283879 |
| RefSeq:XP_002283879.1 | RefSeq:XP_002283879.3 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr14:+:1882180..1883914
Molecular Weight (calculated)
9907.1 Da
IEP (calculated)
9.973
GRAVY (calculated)
0.030
Length
91 amino acids
Sequence
(BLAST)
(BLAST)
1: MAESMSMGAS IRKWVVENKL RAVGCLWLSG IGGSIAYNWS QPGMKTSVKI IHARLHAQAL TLAALAGAAA VEYYDRSVKK TDEMTHSVRL D
1: MAEPKTKVAE IREWIIEHKL RTVGCLWLSG ISGSIAYNWS KPAMKTSVRI IHARLHAQAL TLAALAGAAA VEYYDHKSGA TDRIPKFLKP DNLNKD
Arabidopsis Description
Hypoxia-responsive family protein [Source:UniProtKB/TrEMBL;Acc:Q8LG60]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.