Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG29392 | Sorghum | plasma membrane | 84.71 | 86.11 |
| TraesCSU01G077000.2 | Wheat | cytosol, nucleus, plasma membrane | 30.76 | 61.07 |
| Zm00001d019327_P001 | Maize | cytosol, peroxisome, plasma membrane | 51.44 | 54.89 |
| Zm00001d034473_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 7.73 | 54.43 |
| Zm00001d014391_P008 | Maize | plasma membrane | 47.48 | 48.0 |
| Zm00001d005479_P001 | Maize | plasma membrane | 47.66 | 45.22 |
| Zm00001d007397_P003 | Maize | cytosol, peroxisome, plasma membrane | 38.31 | 37.43 |
| Zm00001d048129_P004 | Maize | cytosol, peroxisome, plasma membrane | 32.73 | 35.27 |
| Zm00001d033367_P001 | Maize | cytosol, nucleus, plasma membrane | 31.3 | 32.22 |
| Zm00001d030846_P001 | Maize | plasma membrane | 31.3 | 30.74 |
| Zm00001d033625_P015 | Maize | plasma membrane | 16.19 | 18.91 |
| Zm00001d013492_P001 | Maize | plasma membrane | 16.01 | 16.01 |
| Zm00001d039341_P126 | Maize | plasma membrane | 19.06 | 8.16 |
Protein Annotations
| EntrezGene:103626569 | MapMan:24.2.3.10 | UniProt:A0A1D6GZH1 | ProteinID:AQK68139.1 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0010044 |
| GO:GO:0015083 | GO:GO:0015690 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030001 | GO:GO:0046873 |
| GO:GO:1902602 | HAMAP:MF_00221 | InterPro:NRAMP_fam | PFAM:PF01566 | PRINTS:PR00447 | PANTHER:PTHR11706 |
| PANTHER:PTHR11706:SF48 | TIGRFAMs:TIGR01197 | TMHMM:TMhelix | UniParc:UPI000842CAB0 | EnsemblPlantsGene:Zm00001d015133 | EnsemblPlants:Zm00001d015133_P001 |
| EnsemblPlants:Zm00001d015133_T001 | SEG:seg | : | : | : | : |
Description
Metal transporter Nramp6
Coordinates
chr5:+:76814418..76818198
Molecular Weight (calculated)
59565.0 Da
IEP (calculated)
8.299
GRAVY (calculated)
0.560
Length
556 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQAGDETPG EIGREAARRE AALRSGGGDA GERVDKAVVD GGEDERFRVQ RKWRRFLAHV GPGALVAIGF LDPSNLETDM QAGADFKYQL LWVILVGMVF
101: ALLIQTLAAN LGVKTGKHLA ELCREEYPRS VNICLWIIAE LAVISDDIPE VLGTAFAFNI LLGIPVWAGV VLTVLSTLLL LGVERFGARK LEFVVAAFMF
201: AMAACFFGEL SYLRPSAGEV VEGMFVPRLR GKGAAANAIA LFGAIITPYN LFLHSALVLS RKTPRSVKSI RAACRYFLVE CSLAFVVAFL INVAVVVVAG
301: SICNAAGGNL SPADAAACGD LTLQSTPLLL RDVLGRSSSV VYAVALLASG QSTTISCTFA GQVIMQGFLD MRMKSWVRNL TTRAIAIAPS LVVSIVSGPS
401: GAGKLIVFSS MVLSFELPFA LIPLLKFCNS SNKVGPLKES IYVRNRPTVV IAWALSFALI VVNTYFLVWT YVDWLVHSRL PKYATALLSV AVLALMAAYL
501: AFVVYLAFRR DAVRTYVPVS ERAEDGSGSQ AVAAAASADD ADMPAPFRKD LADAST
101: ALLIQTLAAN LGVKTGKHLA ELCREEYPRS VNICLWIIAE LAVISDDIPE VLGTAFAFNI LLGIPVWAGV VLTVLSTLLL LGVERFGARK LEFVVAAFMF
201: AMAACFFGEL SYLRPSAGEV VEGMFVPRLR GKGAAANAIA LFGAIITPYN LFLHSALVLS RKTPRSVKSI RAACRYFLVE CSLAFVVAFL INVAVVVVAG
301: SICNAAGGNL SPADAAACGD LTLQSTPLLL RDVLGRSSSV VYAVALLASG QSTTISCTFA GQVIMQGFLD MRMKSWVRNL TTRAIAIAPS LVVSIVSGPS
401: GAGKLIVFSS MVLSFELPFA LIPLLKFCNS SNKVGPLKES IYVRNRPTVV IAWALSFALI VVNTYFLVWT YVDWLVHSRL PKYATALLSV AVLALMAAYL
501: AFVVYLAFRR DAVRTYVPVS ERAEDGSGSQ AVAAAASADD ADMPAPFRKD LADAST
001: MAAETASGSN RSISNSPLIE NSDSNQILVP EKKSWKNFFS YLGPGFLVSI AYIDPGNFET DLQSGAQYKY ELLWIILVAS CAALVIQSLA ANLGVVTGKH
101: LAEHCRAEYS KVPNFMLWVV AEIAVVACDI PEVIGTAFAL NMLFNIPVWI GVLLTGLSTL ILLALQQYGI RKLEFLIAFL VFTIALCFFV ELHYSKPDPK
201: EVLYGLFVPQ LKGNGATGLA ISLLGAMVMP HNLFLHSALV LSRKIPRSVT GIKEACRYYL IESGLALMVA FLINVSVISV SGAVCNASDL SPEDRASCQD
301: LDLNKASFLL RNVVGKWSSK LFAIALLASG QSSTITGTYA GQYVMQGFLD LRLEPWLRNF LTRCLAIIPS LIVALIGGSA GAGKLIIIAS MILSFELPFA
401: LVPLLKFTSS KTKMGSHANS LVISSVTWII GGLIMGINIY YLVSSFIKLL LHSHMNLVAI VFLGVLGFSG IATYLAAISY LVLRKNRESS STHFLDFSNS
501: QTEETLPRED IANMQLPNRV AVIGDLN
101: LAEHCRAEYS KVPNFMLWVV AEIAVVACDI PEVIGTAFAL NMLFNIPVWI GVLLTGLSTL ILLALQQYGI RKLEFLIAFL VFTIALCFFV ELHYSKPDPK
201: EVLYGLFVPQ LKGNGATGLA ISLLGAMVMP HNLFLHSALV LSRKIPRSVT GIKEACRYYL IESGLALMVA FLINVSVISV SGAVCNASDL SPEDRASCQD
301: LDLNKASFLL RNVVGKWSSK LFAIALLASG QSSTITGTYA GQYVMQGFLD LRLEPWLRNF LTRCLAIIPS LIVALIGGSA GAGKLIIIAS MILSFELPFA
401: LVPLLKFTSS KTKMGSHANS LVISSVTWII GGLIMGINIY YLVSSFIKLL LHSHMNLVAI VFLGVLGFSG IATYLAAISY LVLRKNRESS STHFLDFSNS
501: QTEETLPRED IANMQLPNRV AVIGDLN
Arabidopsis Description
NRAMP6Metal transporter Nramp6 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.