Factsheet for Zm00001d033367_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG38042	Sorghum	cytosol, nucleus, plasma membrane	91.67	90.66
TraesCS4A01G237200.1	Wheat	cytosol, peroxisome, plasma membrane	73.7	74.95
TraesCS4B01G078000.1	Wheat	cytosol, peroxisome, plasma membrane	73.7	74.95
TraesCS4D01G076500.1	Wheat	cytosol, peroxisome, plasma membrane	73.52	74.91
HORVU4Hr1G013220.1	Barley	mitochondrion, peroxisome, plasma membrane	73.89	72.68
GSMUA_Achr9P26850_001	Banana	plasma membrane	55.0	70.05
Zm00001d030846_P001	Maize	plasma membrane	72.78	69.43
GSMUA_Achr4P32750_001	Banana	peroxisome, plasma membrane, vacuole	57.22	66.31
Zm00001d048129_P004	Maize	cytosol, peroxisome, plasma membrane	62.59	65.5
KRH61379	Soybean	cytosol, peroxisome, plasma membrane	62.04	64.67
KRH52059	Soybean	cytosol, nucleus, plasma membrane	62.22	64.37
AT1G47240.1	Thale cress	plasma membrane	62.78	63.96
CDY47594	Canola	cytosol, nucleus, plasma membrane	62.41	63.95
CDY17036	Canola	cytosol, nucleus, plasma membrane	62.41	63.95
Bra040791.1-P	Field mustard	cytosol, nucleus, plasma membrane	62.41	63.95
Bra040711.1-P	Field mustard	cytosol, peroxisome, plasma membrane	62.78	63.72
VIT_18s0001g09490.t01	Wine grape	cytosol, peroxisome, plasma membrane	63.15	63.62
CDY17090	Canola	cytosol, peroxisome, plasma membrane	62.59	63.41
PGSC0003DMT400059923	Potato	cytosol, peroxisome, plasma membrane	60.0	62.55
CDY06751	Canola	plasma membrane	47.96	61.81
PGSC0003DMT400055473	Potato	cytosol, peroxisome, plasma membrane	61.67	61.67
Solyc04g078250.2.1	Tomato	cytosol, nucleus, plasma membrane	58.7	61.08
CDY64917	Canola	cytosol, plasma membrane, plastid	59.81	60.83
CDY62556	Canola	plasma membrane	59.81	60.71
Bra012577.1-P	Field mustard	cytosol, plasma membrane, plastid	59.81	60.71
AT4G18790.1	Thale cress	plasma membrane	58.89	60.0
Os03t0606600-00	Rice	extracellular, mitochondrion, peroxisome	24.07	59.63
Solyc04g078230.1.1	Tomato	cytosol, extracellular, plastid	17.41	57.67
KRH47958	Soybean	cytosol, nucleus, plasma membrane	57.22	55.48
KRH06520	Soybean	cytosol, nucleus, plasma membrane	57.22	55.28
Solyc04g078240.1.1	Tomato	cytosol	15.0	50.31
Os01t0733001-00	Rice	endoplasmic reticulum, nucleus	10.74	47.15
Zm00001d034473_P001	Maize	endoplasmic reticulum, extracellular, vacuole	5.37	36.71
Zm00001d014391_P008	Maize	plasma membrane	34.26	33.64
Zm00001d015133_P001	Maize	cytosol, peroxisome, plasma membrane	32.22	31.3
Zm00001d019327_P001	Maize	cytosol, peroxisome, plasma membrane	29.81	30.9
Zm00001d005479_P001	Maize	plasma membrane	33.33	30.72
Zm00001d007397_P003	Maize	cytosol, peroxisome, plasma membrane	28.52	27.07
Zm00001d033625_P015	Maize	plasma membrane	16.48	18.7
Zm00001d013492_P001	Maize	plasma membrane	16.48	16.01
Zm00001d039341_P126	Maize	plasma membrane	18.52	7.7

Protein Annotations

EntrezGene:103643755	MapMan:24.2.3.10	UniProt:A0A1D6KY99	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001	GO:GO:0046873
HAMAP:MF_00221	InterPro:NRAMP_fam	ProteinID:ONM07417.1	PFAM:PF01566	PRINTS:PR00447	PANTHER:PTHR11706
PANTHER:PTHR11706:SF46	TIGRFAMs:TIGR01197	TMHMM:TMhelix	UniParc:UPI0004DE87F4	EnsemblPlantsGene:Zm00001d033367	EnsemblPlants:Zm00001d033367_P001
EnsemblPlants:Zm00001d033367_T001	SEG:seg	:	:	:	:

Description

Metal transporter Nramp3

Coordinates

chr1:+:260532563..260535314

Molecular Weight (calculated)

59224.5 Da

IEP (calculated)

5.326

GRAVY (calculated)

0.429

Length

540 amino acids

Sequence
(BLAST)

001: MAANHNADDA AREPVASASP PASEAEHRAL LRPSSFISAI SDDNEGCKER AFEPSEKVIV SVSGDPEGDA SEERAFYASG GCMPPFSWRK LWAFSGPGFL
101: MSIAFVDPGN IEGDLQAGAT AGGTLLWVLV WATAMGLLVQ LHAARLGVAT GRHLAELCRD EYPDWARRAL WLMAEVALVS ADIQEVIGSA IAIKILSHGL
201: LPLWGGVVIT ALDCFMILSL ENYGVRKLEA LFAVLITTMA CSFAWMFVET EPSGKDLFIG ILVPKLSSRS IKQAVGLVGC VITPHNVFLH SALVQSRKID
301: PDKEYEVREA LRYYSIESTL ALVVPLMINL FVTTVFAKGF YGTKEADSIG LENAGKYLQE KFGGDFFPIL YIWGVGLLAA GTSSTITGTY AGQFIMGGFL
401: NWRLKKWIRA LITRSFAIVP TIIVALYFNN SGYELDVLNE WLNVLQSVQI PFSLIPLITL VSKEEVMGVY KIGPRMKILT WIVASLPILI NSYMLLDFFS
501: LEMGGMLYNT TLCVAVVAYS MFILYLIFRG MKFPSYLTTT

Best Arabidopsis Sequence Match ( AT1G47240.1 )
(BLAST)

001: MENDVKENLE EEEDRLLPPP PPSQSLPSTD SESEAAFETN EKILIVDFES PDDPTTGDTP PPFSWRKLWL FTGPGFLMSI AFLDPGNLEG DLQAGAIAGY
101: SLLWLLMWAT AMGLLIQMLS ARVGVATGRH LAELCRDEYP TWARYVLWSM AELALIGADI QEVIGSAIAI QILSRGFLPL WAGVVITASD CFLFLFLENY
201: GVRKLEAVFA VLIATMGLSF AWMFGETKPS GKELMIGILL PRLSSKTIRQ AVGVVGCVIM PHNVFLHSAL VQSRKIDPKR KSRVQEALNY YLIESSVALF
301: ISFMINLFVT TVFAKGFYGT EKANNIGLVN AGQYLQEKFG GGLLPILYIW GIGLLAAGQS STITGTYAGQ FIMGGFLNLR LKKWMRAVIT RSCAIVPTMI
401: VAIVFNTSEA SLDVLNEWLN VLQSVQIPFA LLPLLTLVSK EEIMGDFKIG PILQRIAWTV AALVMIINGY LLLDFFVSEV DGFLFGVTVC VWTTAYIAFI
501: VYLISHSNFF PSPWSSSSIE LPKRVSVSNS

Arabidopsis Description

NRAMP2Metal transporter Nramp2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6B2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.