Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 3
- peroxisome 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P26850_001 | Banana | plasma membrane | 68.24 | 75.0 |
| GSMUA_Achr6P07820_001 | Banana | cytosol, plasma membrane, vacuole | 66.52 | 69.98 |
| GSMUA_Achr3P18820_001 | Banana | cytosol, peroxisome, plasma membrane | 64.38 | 63.03 |
| Os12t0581600-01 | Rice | cytosol, nucleus, plasma membrane | 72.96 | 62.85 |
| EES17269 | Sorghum | cytosol, peroxisome, plasma membrane | 72.53 | 62.13 |
| CDY06751 | Canola | plasma membrane | 55.79 | 62.05 |
| TraesCS5A01G072200.1 | Wheat | cytosol, plasma membrane, vacuole | 72.1 | 61.43 |
| Solyc04g078230.1.1 | Tomato | cytosol, extracellular, plastid | 21.46 | 61.35 |
| TraesCS5B01G078700.1 | Wheat | cytosol, plasma membrane, vacuole | 71.89 | 61.24 |
| HORVU5Hr1G018850.2 | Barley | cytosol, nucleus, plasma membrane | 71.67 | 61.06 |
| TraesCS5D01G084900.1 | Wheat | plasma membrane | 71.67 | 61.06 |
| KRH61379 | Soybean | cytosol, peroxisome, plasma membrane | 67.17 | 60.42 |
| Zm00001d030846_P001 | Maize | plasma membrane | 72.75 | 59.89 |
| KRH52059 | Soybean | cytosol, nucleus, plasma membrane | 66.74 | 59.58 |
| VIT_18s0001g09490.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 68.45 | 59.51 |
| CDY17036 | Canola | cytosol, nucleus, plasma membrane | 66.52 | 58.82 |
| AT1G47240.1 | Thale cress | plasma membrane | 66.74 | 58.68 |
| CDY47594 | Canola | cytosol, nucleus, plasma membrane | 66.31 | 58.63 |
| TraesCS4A01G237200.1 | Wheat | cytosol, peroxisome, plasma membrane | 66.74 | 58.57 |
| TraesCS4D01G076500.1 | Wheat | cytosol, peroxisome, plasma membrane | 66.52 | 58.49 |
| Bra040791.1-P | Field mustard | cytosol, nucleus, plasma membrane | 66.09 | 58.44 |
| TraesCS4B01G078000.1 | Wheat | cytosol, peroxisome, plasma membrane | 66.31 | 58.19 |
| CDY17090 | Canola | cytosol, peroxisome, plasma membrane | 66.52 | 58.16 |
| PGSC0003DMT400059923 | Potato | cytosol, peroxisome, plasma membrane | 64.59 | 58.11 |
| Bra040711.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 65.88 | 57.71 |
| PGSC0003DMT400055473 | Potato | cytosol, peroxisome, plasma membrane | 66.74 | 57.59 |
| KXG38042 | Sorghum | cytosol, nucleus, plasma membrane | 67.17 | 57.33 |
| Zm00001d033367_P001 | Maize | cytosol, nucleus, plasma membrane | 66.31 | 57.22 |
| Solyc04g078250.2.1 | Tomato | cytosol, nucleus, plasma membrane | 63.09 | 56.65 |
| HORVU4Hr1G013220.1 | Barley | mitochondrion, peroxisome, plasma membrane | 66.31 | 56.28 |
| Bra012577.1-P | Field mustard | cytosol, plasma membrane, plastid | 61.8 | 54.14 |
| CDY62556 | Canola | plasma membrane | 61.8 | 54.14 |
| CDY64917 | Canola | cytosol, plasma membrane, plastid | 61.59 | 54.05 |
| AT4G18790.1 | Thale cress | plasma membrane | 61.37 | 53.96 |
| KRH47958 | Soybean | cytosol, nucleus, plasma membrane | 60.52 | 50.63 |
| KRH06520 | Soybean | cytosol, nucleus, plasma membrane | 60.3 | 50.27 |
| Os03t0606600-00 | Rice | extracellular, mitochondrion, peroxisome | 23.39 | 50.0 |
| Solyc04g078240.1.1 | Tomato | cytosol | 15.02 | 43.48 |
| GSMUA_Achr5P25950_001 | Banana | cytosol, nucleus, plasma membrane | 33.48 | 36.03 |
| Os03t0607400-01 | Rice | cytosol, peroxisome, plasma membrane, plastid | 16.31 | 35.19 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plasma membrane | 38.2 | 32.78 |
| GSMUA_Achr11P... | Banana | cytosol | 35.41 | 31.73 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plasma membrane | 37.55 | 31.59 |
| Os01t0733001-00 | Rice | endoplasmic reticulum, nucleus | 6.22 | 23.58 |
| GSMUA_Achr9P10350_001 | Banana | plasma membrane | 18.67 | 7.21 |
| GSMUA_Achr6P31160_001 | Banana | plasma membrane | 19.31 | 7.08 |
| GSMUA_Achr7P01280_001 | Banana | plasma membrane | 19.53 | 6.15 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P32750_001 | EnsemblPlants:GSMUA_Achr4T32750_001 | EnsemblPlantsGene:GSMUA_Achr4G32750_001 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030001 | GO:GO:0046873 |
| InterPro:NRAMP_fam | PANTHER:PTHR11706 | PANTHER:PTHR11706:SF46 | PFAM:PF01566 | PRINTS:PR00447 | TIGRFAMs:TIGR01197 |
| TMHMM:TMhelix | UniParc:UPI0002969ECC | UniProt:M0SU37 | MapMan:24.2.3.10 | : | : |
Description
Metal transporter Nramp2 [Source:GMGC_GENE;Acc:GSMUA_Achr4G32750_001]
Coordinates
chr4:+:29400743..29405817
Molecular Weight (calculated)
51792.1 Da
IEP (calculated)
9.042
GRAVY (calculated)
0.567
Length
466 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIAFLDPGN LEGDLQAGAI AGLGVVTGRH LAELCREEYP RWARLALWFM AEVAMIGADI QEVIGSAIAI KILSRGVLPL WVGVIITAMD CFIFLFLENY
101: GVRKLEGFFA VLITTMASSF AWMFREAKPS EKELLIGVLV PKLGSKTIRQ AVGVVGCVIM PHNVFLHSAL VQSRKVDPDK KSHVREALRY YSIESTIALI
201: VSFMINLFVT TVFAKGFYGT KEAENIGLEN AGKFLQEKYG GGIFPILYIW GIGLLAAGQS STLTGTYAGQ FIMGGFLNLR LKKWIRSLIT RSFAIVPTIV
301: VALFFDTSDS ALDVLNQWLN VLQSVQIPFA LIPLLTLVSK EQVMGDFKIS RAIQMLMWIV AALLIIINGY LLLEFFSTEI RGLLLGSICS AAIAVYTIFV
401: IYLILYGGDF TTQLASAIHR RFRPGQNYFC SIFKRTWNYS NISACNRRTY VKSAAFYFVI LEEESS
101: GVRKLEGFFA VLITTMASSF AWMFREAKPS EKELLIGVLV PKLGSKTIRQ AVGVVGCVIM PHNVFLHSAL VQSRKVDPDK KSHVREALRY YSIESTIALI
201: VSFMINLFVT TVFAKGFYGT KEAENIGLEN AGKFLQEKYG GGIFPILYIW GIGLLAAGQS STLTGTYAGQ FIMGGFLNLR LKKWIRSLIT RSFAIVPTIV
301: VALFFDTSDS ALDVLNQWLN VLQSVQIPFA LIPLLTLVSK EQVMGDFKIS RAIQMLMWIV AALLIIINGY LLLEFFSTEI RGLLLGSICS AAIAVYTIFV
401: IYLILYGGDF TTQLASAIHR RFRPGQNYFC SIFKRTWNYS NISACNRRTY VKSAAFYFVI LEEESS
001: MENDVKENLE EEEDRLLPPP PPSQSLPSTD SESEAAFETN EKILIVDFES PDDPTTGDTP PPFSWRKLWL FTGPGFLMSI AFLDPGNLEG DLQAGAIAGY
101: SLLWLLMWAT AMGLLIQMLS ARVGVATGRH LAELCRDEYP TWARYVLWSM AELALIGADI QEVIGSAIAI QILSRGFLPL WAGVVITASD CFLFLFLENY
201: GVRKLEAVFA VLIATMGLSF AWMFGETKPS GKELMIGILL PRLSSKTIRQ AVGVVGCVIM PHNVFLHSAL VQSRKIDPKR KSRVQEALNY YLIESSVALF
301: ISFMINLFVT TVFAKGFYGT EKANNIGLVN AGQYLQEKFG GGLLPILYIW GIGLLAAGQS STITGTYAGQ FIMGGFLNLR LKKWMRAVIT RSCAIVPTMI
401: VAIVFNTSEA SLDVLNEWLN VLQSVQIPFA LLPLLTLVSK EEIMGDFKIG PILQRIAWTV AALVMIINGY LLLDFFVSEV DGFLFGVTVC VWTTAYIAFI
501: VYLISHSNFF PSPWSSSSIE LPKRVSVSNS
101: SLLWLLMWAT AMGLLIQMLS ARVGVATGRH LAELCRDEYP TWARYVLWSM AELALIGADI QEVIGSAIAI QILSRGFLPL WAGVVITASD CFLFLFLENY
201: GVRKLEAVFA VLIATMGLSF AWMFGETKPS GKELMIGILL PRLSSKTIRQ AVGVVGCVIM PHNVFLHSAL VQSRKIDPKR KSRVQEALNY YLIESSVALF
301: ISFMINLFVT TVFAKGFYGT EKANNIGLVN AGQYLQEKFG GGLLPILYIW GIGLLAAGQS STITGTYAGQ FIMGGFLNLR LKKWMRAVIT RSCAIVPTMI
401: VAIVFNTSEA SLDVLNEWLN VLQSVQIPFA LLPLLTLVSK EEIMGDFKIG PILQRIAWTV AALVMIINGY LLLDFFVSEV DGFLFGVTVC VWTTAYIAFI
501: VYLISHSNFF PSPWSSSSIE LPKRVSVSNS
Arabidopsis Description
NRAMP2Metal transporter Nramp2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6B2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.