Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- plasma membrane 5
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47594 | Canola | cytosol, nucleus, plasma membrane | 89.26 | 70.97 |
| CDY17036 | Canola | cytosol, nucleus, plasma membrane | 89.26 | 70.97 |
| CDY17090 | Canola | cytosol, peroxisome, plasma membrane | 90.21 | 70.92 |
| AT1G47240.1 | Thale cress | plasma membrane | 88.31 | 69.81 |
| GSMUA_Achr9P26850_001 | Banana | plasma membrane | 63.48 | 62.74 |
| KRH61379 | Soybean | cytosol, peroxisome, plasma membrane | 71.12 | 57.53 |
| KRH52059 | Soybean | cytosol, nucleus, plasma membrane | 71.36 | 57.28 |
| GSMUA_Achr4P32750_001 | Banana | peroxisome, plasma membrane, vacuole | 62.05 | 55.79 |
| GSMUA_Achr6P07820_001 | Banana | cytosol, plasma membrane, vacuole | 58.23 | 55.08 |
| PGSC0003DMT400055473 | Potato | cytosol, peroxisome, plasma membrane | 69.93 | 54.26 |
| GSMUA_Achr3P18820_001 | Banana | cytosol, peroxisome, plasma membrane | 60.86 | 53.57 |
| CDX76871 | Canola | cytosol, peroxisome, plasma membrane | 65.39 | 53.2 |
| PGSC0003DMT400059923 | Potato | cytosol, peroxisome, plasma membrane | 65.63 | 53.09 |
| CDY21478 | Canola | plasma membrane | 62.53 | 52.09 |
| CDY57441 | Canola | peroxisome | 63.01 | 51.56 |
| TraesCS5D01G084900.1 | Wheat | plasma membrane | 66.83 | 51.19 |
| TraesCS5B01G078700.1 | Wheat | cytosol, plasma membrane, vacuole | 66.59 | 51.01 |
| TraesCS5A01G072200.1 | Wheat | cytosol, plasma membrane, vacuole | 66.35 | 50.82 |
| HORVU5Hr1G018850.2 | Barley | cytosol, nucleus, plasma membrane | 66.35 | 50.82 |
| CDY64917 | Canola | cytosol, plasma membrane, plastid | 64.2 | 50.66 |
| CDY62556 | Canola | plasma membrane | 64.2 | 50.56 |
| EES17269 | Sorghum | cytosol, peroxisome, plasma membrane | 65.39 | 50.37 |
| Os12t0581600-01 | Rice | cytosol, nucleus, plasma membrane | 64.92 | 50.28 |
| HORVU4Hr1G069320.1 | Barley | vacuole | 62.53 | 50.19 |
| TraesCS4D01G254100.1 | Wheat | cytosol, plasma membrane, vacuole | 62.05 | 50.1 |
| Solyc04g078250.2.1 | Tomato | cytosol, nucleus, plasma membrane | 62.05 | 50.1 |
| TraesCS4B01G254300.1 | Wheat | cytosol, plasma membrane, vacuole | 62.05 | 49.9 |
| TraesCS4A01G050500.1 | Wheat | cytosol, peroxisome, plasma membrane | 62.05 | 49.9 |
| CDX83202 | Canola | plasma membrane | 63.96 | 49.81 |
| EER92665 | Sorghum | cytosol, peroxisome, plasma membrane | 61.34 | 49.81 |
| Zm00001d048129_P004 | Maize | cytosol, peroxisome, plasma membrane | 61.1 | 49.61 |
| TraesCS4A01G237200.1 | Wheat | cytosol, peroxisome, plasma membrane | 62.29 | 49.15 |
| TraesCS4D01G076500.1 | Wheat | cytosol, peroxisome, plasma membrane | 62.05 | 49.06 |
| TraesCS4B01G078000.1 | Wheat | cytosol, peroxisome, plasma membrane | 62.05 | 48.96 |
| Os03t0208500-01 | Rice | plasma membrane | 61.1 | 48.85 |
| Zm00001d033367_P001 | Maize | cytosol, nucleus, plasma membrane | 61.81 | 47.96 |
| Zm00001d030846_P001 | Maize | plasma membrane | 64.68 | 47.88 |
| HORVU4Hr1G013220.1 | Barley | mitochondrion, peroxisome, plasma membrane | 62.29 | 47.54 |
| KXG38042 | Sorghum | cytosol, nucleus, plasma membrane | 61.81 | 47.44 |
| Os03t0606600-00 | Rice | extracellular, mitochondrion, peroxisome | 21.0 | 40.37 |
| CDY12837 | Canola | nucleus | 63.01 | 39.64 |
| CDY35053 | Canola | mitochondrion, plasma membrane | 22.2 | 32.29 |
| CDY35054 | Canola | extracellular | 8.11 | 31.48 |
| CDY33364 | Canola | cytosol, peroxisome, plasma membrane | 32.46 | 27.64 |
| CDY39940 | Canola | cytosol, peroxisome, plasma membrane | 32.94 | 26.59 |
| CDX87346 | Canola | cytosol, peroxisome, plasma membrane | 32.94 | 26.59 |
| CDY63970 | Canola | plastid | 33.65 | 26.5 |
| CDX79348 | Canola | cytosol, plasma membrane, vacuole | 33.17 | 26.43 |
| CDX67970 | Canola | plasma membrane | 28.88 | 25.0 |
| CDY64859 | Canola | cytosol, peroxisome, plasma membrane, plastid | 33.41 | 21.05 |
| Os03t0607400-01 | Rice | cytosol, peroxisome, plasma membrane, plastid | 7.64 | 14.81 |
| CDY46091 | Canola | cytosol, nucleus, plastid | 5.97 | 13.02 |
| CDY35055 | Canola | endoplasmic reticulum, extracellular, vacuole | 2.63 | 9.48 |
| Os01t0733001-00 | Rice | endoplasmic reticulum, nucleus | 2.39 | 8.13 |
| CDY10393 | Canola | plasma membrane | 17.18 | 6.02 |
| CDX70318 | Canola | plasma membrane | 17.18 | 6.01 |
Protein Annotations
| EnsemblPlants:CDY06751 | EnsemblPlantsGene:GSBRNA2T00122963001 | GO:A0A078F006 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0030001 | GO:GO:0046873 | InterPro:NRAMP_fam |
| PANTHER:PTHR11706 | PANTHER:PTHR11706:SF46 | PFAM:PF01566 | PRINTS:PR00447 | ProteinID:CDY06751 | ProteinID:CDY06751.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EDC1CE | MapMan:24.2.3.10 | : | : |
Description
BnaA10g05300D
Coordinates
chrLK031972:+:834955..837552
Molecular Weight (calculated)
46342.6 Da
IEP (calculated)
9.138
GRAVY (calculated)
0.646
Length
419 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMPIWTWSL IGLGYLLDHC PIWTTHYCPK LKWSKWSCPI GPWTDHLTAL VIGSAIAIQI LSRGVLPLWA AVVITASDCF LFLFLENYGV RKLEAVFAVL
101: IATMGLSFAW MFGETKPSGK EIMIGILLPR LSSKTIRQAV GVVGCVIMPH NVFLHSALVQ SRQIDPKRKS RVQEALNYYL IESSLALFIS FMINLFVTTV
201: FAKGFYGTEK ANNIGLVNAG QYLQEKFGGG LLPILYIWGI GLLAAGQSST ITGTYAGQFI MGGFLNLRLK KWMRAVITRS CAIVPTMIVA IVFNTSEASL
301: DVLNEWLNVL QSVQIPFALL PLLTLVSKEE VMGDFKIGPI LQRIAWTVAA LVMIINGYLL LDFFVSEVNG FMFGVTVCVW TTAYVAFIVY LISHSNFIPS
401: PWSSSSSIEL PKRVTVSNS
101: IATMGLSFAW MFGETKPSGK EIMIGILLPR LSSKTIRQAV GVVGCVIMPH NVFLHSALVQ SRQIDPKRKS RVQEALNYYL IESSLALFIS FMINLFVTTV
201: FAKGFYGTEK ANNIGLVNAG QYLQEKFGGG LLPILYIWGI GLLAAGQSST ITGTYAGQFI MGGFLNLRLK KWMRAVITRS CAIVPTMIVA IVFNTSEASL
301: DVLNEWLNVL QSVQIPFALL PLLTLVSKEE VMGDFKIGPI LQRIAWTVAA LVMIINGYLL LDFFVSEVNG FMFGVTVCVW TTAYVAFIVY LISHSNFIPS
401: PWSSSSSIEL PKRVTVSNS
001: MAAETASGSN RSISNSPLIE NSDSNQILVP EKKSWKNFFS YLGPGFLVSI AYIDPGNFET DLQSGAQYKY ELLWIILVAS CAALVIQSLA ANLGVVTGKH
101: LAEHCRAEYS KVPNFMLWVV AEIAVVACDI PEVIGTAFAL NMLFNIPVWI GVLLTGLSTL ILLALQQYGI RKLEFLIAFL VFTIALCFFV ELHYSKPDPK
201: EVLYGLFVPQ LKGNGATGLA ISLLGAMVMP HNLFLHSALV LSRKIPRSVT GIKEACRYYL IESGLALMVA FLINVSVISV SGAVCNASDL SPEDRASCQD
301: LDLNKASFLL RNVVGKWSSK LFAIALLASG QSSTITGTYA GQYVMQGFLD LRLEPWLRNF LTRCLAIIPS LIVALIGGSA GAGKLIIIAS MILSFELPFA
401: LVPLLKFTSS KTKMGSHANS LVISSVTWII GGLIMGINIY YLVSSFIKLL LHSHMNLVAI VFLGVLGFSG IATYLAAISY LVLRKNRESS STHFLDFSNS
501: QTEETLPRED IANMQLPNRV AVIGDLN
101: LAEHCRAEYS KVPNFMLWVV AEIAVVACDI PEVIGTAFAL NMLFNIPVWI GVLLTGLSTL ILLALQQYGI RKLEFLIAFL VFTIALCFFV ELHYSKPDPK
201: EVLYGLFVPQ LKGNGATGLA ISLLGAMVMP HNLFLHSALV LSRKIPRSVT GIKEACRYYL IESGLALMVA FLINVSVISV SGAVCNASDL SPEDRASCQD
301: LDLNKASFLL RNVVGKWSSK LFAIALLASG QSSTITGTYA GQYVMQGFLD LRLEPWLRNF LTRCLAIIPS LIVALIGGSA GAGKLIIIAS MILSFELPFA
401: LVPLLKFTSS KTKMGSHANS LVISSVTWII GGLIMGINIY YLVSSFIKLL LHSHMNLVAI VFLGVLGFSG IATYLAAISY LVLRKNRESS STHFLDFSNS
501: QTEETLPRED IANMQLPNRV AVIGDLN
Arabidopsis Description
NRAMP6Metal transporter Nramp6 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.