Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 2
- golgi 2
- plasma membrane 4
- endoplasmic reticulum 3
- vacuole 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026089.1-P | Field mustard | plasma membrane | 98.26 | 60.47 |
| CDY33364 | Canola | cytosol, peroxisome, plasma membrane | 92.71 | 54.27 |
| AT1G15960.1 | Thale cress | plasma membrane | 90.62 | 49.53 |
| CDY39940 | Canola | cytosol, peroxisome, plasma membrane | 83.68 | 46.44 |
| CDX87346 | Canola | cytosol, peroxisome, plasma membrane | 83.68 | 46.44 |
| CDX79348 | Canola | cytosol, plasma membrane, vacuole | 83.33 | 45.63 |
| CDY63970 | Canola | plastid | 82.64 | 44.74 |
| CDX67970 | Canola | plasma membrane | 71.18 | 42.36 |
| KRH47347 | Soybean | plasma membrane | 78.12 | 41.28 |
| VIT_09s0070g00210.t01 | Wine grape | plastid | 77.08 | 41.04 |
| KRH23641 | Soybean | plastid | 77.08 | 40.81 |
| KRH09654 | Soybean | plastid | 77.08 | 40.66 |
| Solyc03g116900.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 72.22 | 39.85 |
| Bra033988.1-P | Field mustard | plasma membrane | 73.96 | 39.23 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plasma membrane | 73.61 | 39.04 |
| TraesCS7A01G464300.2 | Wheat | plasma membrane | 72.22 | 37.96 |
| TraesCS7B01G364800.1 | Wheat | plasma membrane | 71.88 | 37.77 |
| TraesCS7D01G451900.1 | Wheat | plasma membrane | 71.88 | 37.77 |
| KRH44555 | Soybean | mitochondrion | 77.08 | 37.76 |
| HORVU7Hr1G106570.1 | Barley | plasma membrane | 71.18 | 37.41 |
| Os06t0676000-01 | Rice | cytosol, mitochondrion, plasma membrane, plastid | 70.14 | 36.73 |
| EER90213 | Sorghum | plastid | 68.75 | 36.0 |
| CDY64859 | Canola | cytosol, peroxisome, plasma membrane, plastid | 82.64 | 35.79 |
| Zm00001d014391_P008 | Maize | plasma membrane | 68.06 | 35.64 |
| CDY06751 | Canola | plasma membrane | 32.29 | 22.2 |
| CDY57441 | Canola | peroxisome | 33.33 | 18.75 |
| CDX76871 | Canola | cytosol, peroxisome, plasma membrane | 32.99 | 18.45 |
| CDY64917 | Canola | cytosol, plasma membrane, plastid | 33.33 | 18.08 |
| CDY62556 | Canola | plasma membrane | 33.33 | 18.05 |
| CDY21478 | Canola | plasma membrane | 30.56 | 17.5 |
| CDY47594 | Canola | cytosol, nucleus, plasma membrane | 31.94 | 17.46 |
| CDY17036 | Canola | cytosol, nucleus, plasma membrane | 31.94 | 17.46 |
| CDY17090 | Canola | cytosol, peroxisome, plasma membrane | 31.94 | 17.26 |
| CDX83202 | Canola | plasma membrane | 30.9 | 16.54 |
| CDY12837 | Canola | nucleus | 33.68 | 14.56 |
| CDY10393 | Canola | plasma membrane | 18.06 | 4.35 |
| CDX70318 | Canola | plasma membrane | 17.71 | 4.26 |
| CDY35054 | Canola | extracellular | 1.39 | 3.7 |
| CDY46091 | Canola | cytosol, nucleus, plastid | 2.43 | 3.65 |
| CDY35055 | Canola | endoplasmic reticulum, extracellular, vacuole | 0.35 | 0.86 |
Protein Annotations
| MapMan:24.2.3.10 | GO:A0A078HE23 | UniProt:A0A078HE23 | EnsemblPlants:CDY35053 | ProteinID:CDY35053 | ProteinID:CDY35053.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0030001 | GO:GO:0046873 | EnsemblPlantsGene:GSBRNA2T00057920001 | InterPro:NRAMP_fam | PFAM:PF01566 |
| PRINTS:PR00447 | PANTHER:PTHR11706 | PANTHER:PTHR11706:SF38 | TMHMM:TMhelix | UniParc:UPI0004EDFD83 | : |
Description
BnaA06g10630DBnaA06g10630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HE23]
Coordinates
chrLK032346:-:41500..42685
Molecular Weight (calculated)
31203.9 Da
IEP (calculated)
9.871
GRAVY (calculated)
0.672
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLLHRHNLF LHSALVLSRK IPRSVTGIKE ACRYYMIESG LALTVAFLIN VSVISVSGAV CNASDLSPED QASCEDLDLN KASFLLRNVV GKWSSKLFAI
101: ALLASGQSST ITGTYAGQYV MQGFLNLTIR PWLRNFLTRC LAIIPSLIVA LIGGSAGAGK LIIIASMVLS FELPFALVPL LKFTCSKTKM GSHANSLLIS
201: SVTWIIGGLI MGINIYYLVS SFIKLILHGH MKLVAVVFLG ILGFSGIAIY LAAIGYLVFR KNRESSTLAS NSQTADTLPR EDIVNMHT
101: ALLASGQSST ITGTYAGQYV MQGFLNLTIR PWLRNFLTRC LAIIPSLIVA LIGGSAGAGK LIIIASMVLS FELPFALVPL LKFTCSKTKM GSHANSLLIS
201: SVTWIIGGLI MGINIYYLVS SFIKLILHGH MKLVAVVFLG ILGFSGIAIY LAAIGYLVFR KNRESSTLAS NSQTADTLPR EDIVNMHT
001: MAAETASGSN RSISNSPLIE NSDSNQILVP EKKSWKNFFS YLGPGFLVSI AYIDPGNFET DLQSGAQYKY ELLWIILVAS CAALVIQSLA ANLGVVTGKH
101: LAEHCRAEYS KVPNFMLWVV AEIAVVACDI PEVIGTAFAL NMLFNIPVWI GVLLTGLSTL ILLALQQYGI RKLEFLIAFL VFTIALCFFV ELHYSKPDPK
201: EVLYGLFVPQ LKGNGATGLA ISLLGAMVMP HNLFLHSALV LSRKIPRSVT GIKEACRYYL IESGLALMVA FLINVSVISV SGAVCNASDL SPEDRASCQD
301: LDLNKASFLL RNVVGKWSSK LFAIALLASG QSSTITGTYA GQYVMQGFLD LRLEPWLRNF LTRCLAIIPS LIVALIGGSA GAGKLIIIAS MILSFELPFA
401: LVPLLKFTSS KTKMGSHANS LVISSVTWII GGLIMGINIY YLVSSFIKLL LHSHMNLVAI VFLGVLGFSG IATYLAAISY LVLRKNRESS STHFLDFSNS
501: QTEETLPRED IANMQLPNRV AVIGDLN
101: LAEHCRAEYS KVPNFMLWVV AEIAVVACDI PEVIGTAFAL NMLFNIPVWI GVLLTGLSTL ILLALQQYGI RKLEFLIAFL VFTIALCFFV ELHYSKPDPK
201: EVLYGLFVPQ LKGNGATGLA ISLLGAMVMP HNLFLHSALV LSRKIPRSVT GIKEACRYYL IESGLALMVA FLINVSVISV SGAVCNASDL SPEDRASCQD
301: LDLNKASFLL RNVVGKWSSK LFAIALLASG QSSTITGTYA GQYVMQGFLD LRLEPWLRNF LTRCLAIIPS LIVALIGGSA GAGKLIIIAS MILSFELPFA
401: LVPLLKFTSS KTKMGSHANS LVISSVTWII GGLIMGINIY YLVSSFIKLL LHSHMNLVAI VFLGVLGFSG IATYLAAISY LVLRKNRESS STHFLDFSNS
501: QTEETLPRED IANMQLPNRV AVIGDLN
Arabidopsis Description
NRAMP6Metal transporter Nramp6 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.