Skip to main content
crop-pal logo
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY33364 Canola cytosol, peroxisome, plasma membrane 85.96 92.07
Bra026089.1-P Field mustard plasma membrane 81.21 91.45
CDY35053 Canola mitochondrion, plasma membrane 49.53 90.62
AT1G80830.1 Thale cress plastid 87.48 86.65
CDY35054 Canola extracellular 17.46 85.19
CDY35055 Canola endoplasmic reticulum, extracellular, vacuole 18.03 81.9
KRH23641 Soybean plastid 80.46 77.94
KRH09654 Soybean plastid 80.46 77.66
VIT_09s0070g00210.t01 Wine grape plastid 79.13 77.08
KRH47347 Soybean plasma membrane 78.18 75.6
Solyc03g116900.2.1 Tomato cytosol, peroxisome, plasma membrane 74.19 74.9
GSMUA_AchrUn_... Banana cytosol, peroxisome, plasma membrane 76.09 73.85
TraesCS7D01G451900.1 Wheat plasma membrane 74.38 71.53
TraesCS7A01G464300.2 Wheat plasma membrane 74.19 71.35
TraesCS7B01G364800.1 Wheat plasma membrane 74.19 71.35
HORVU7Hr1G106570.1 Barley plasma membrane 73.81 70.99
KRH44555 Soybean mitochondrion 78.75 70.58
EER90213 Sorghum plastid 73.06 70.0
Bra033988.1-P Field mustard plasma membrane 72.11 69.98
Zm00001d014391_P008 Maize plasma membrane 72.68 69.64
Os06t0676000-01 Rice cytosol, mitochondrion, plasma membrane, plastid 72.49 69.45
AT5G67330.1 Thale cress plasma membrane 36.43 37.5
AT2G23150.1 Thale cress plasma membrane 35.86 37.13
AT1G47240.1 Thale cress plasma membrane 35.67 35.47
AT4G18790.1 Thale cress plasma membrane 34.91 34.72
AT5G03280.1 Thale cress plasma membrane 21.82 8.89
Protein Annotations
MapMan:24.2.3.10EntrezGene:838166ProteinID:AAF18493.1ProteinID:AEE29390.1EMBL:AJ291831ArrayExpress:AT1G15960
EnsemblPlantsGene:AT1G15960RefSeq:AT1G15960TAIR:AT1G15960RefSeq:AT1G15960-TAIR-GEnsemblPlants:AT1G15960.1TAIR:AT1G15960.1
EMBL:AY263397GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0006810
GO:GO:0006811GO:GO:0008150GO:GO:0012505GO:GO:0015086GO:GO:0016020GO:GO:0016021
GO:GO:0030001GO:GO:0046873GO:GO:0055072GO:GO:0070574HAMAP:MF_00221RefSeq:NP_173048.3
Symbol:NRAMP6InterPro:NRAMP_famPFAM:PF01566PO:PO:0000013PO:PO:0000230PO:PO:0000293
PO:PO:0007095PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0009006
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0020030PO:PO:0025022PRINTS:PR00447PANTHER:PTHR11706PANTHER:PTHR11706:SF38
UniProt:Q9S9N8TIGRFAMs:TIGR01197TMHMM:TMhelixUniParc:UPI00000A1CCFSEG:seg:
Description
NRAMP6Metal transporter Nramp6 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N8]
Coordinates
chr1:-:5481665..5486105
Molecular Weight (calculated)
57248.7 Da
IEP (calculated)
7.999
GRAVY (calculated)
0.602
Length
527 amino acids
Sequence
(BLAST)
001: MAAETASGSN RSISNSPLIE NSDSNQILVP EKKSWKNFFS YLGPGFLVSI AYIDPGNFET DLQSGAQYKY ELLWIILVAS CAALVIQSLA ANLGVVTGKH
101: LAEHCRAEYS KVPNFMLWVV AEIAVVACDI PEVIGTAFAL NMLFNIPVWI GVLLTGLSTL ILLALQQYGI RKLEFLIAFL VFTIALCFFV ELHYSKPDPK
201: EVLYGLFVPQ LKGNGATGLA ISLLGAMVMP HNLFLHSALV LSRKIPRSVT GIKEACRYYL IESGLALMVA FLINVSVISV SGAVCNASDL SPEDRASCQD
301: LDLNKASFLL RNVVGKWSSK LFAIALLASG QSSTITGTYA GQYVMQGFLD LRLEPWLRNF LTRCLAIIPS LIVALIGGSA GAGKLIIIAS MILSFELPFA
401: LVPLLKFTSS KTKMGSHANS LVISSVTWII GGLIMGINIY YLVSSFIKLL LHSHMNLVAI VFLGVLGFSG IATYLAAISY LVLRKNRESS STHFLDFSNS
501: QTEETLPRED IANMQLPNRV AVIGDLN
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.