Factsheet for AT2G23150.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000573.1-P	Field mustard	golgi, peroxisome, plasma membrane	91.55	91.19
CDX76871	Canola	cytosol, peroxisome, plasma membrane	90.96	89.9
CDY21478	Canola	plasma membrane	87.43	88.47
CDX83202	Canola	plasma membrane	87.62	82.9
KRH28413	Soybean	plasma membrane	77.01	77.47
KRH77065	Soybean	plasma membrane	76.82	77.12
VIT_07s0129g00620.t01	Wine grape	plasma membrane	78.59	76.92
AT5G67330.1	Thale cress	plasma membrane	75.83	75.39
KRH04493	Soybean	peroxisome	76.03	75.0
KRH58028	Soybean	plasma membrane	76.03	75.0
Solyc02g092800.2.1	Tomato	cytosol, peroxisome, plasma membrane	73.67	73.67
PGSC0003DMT400064287	Potato	cytosol, nucleus, plasma membrane	73.87	73.01
AT1G47240.1	Thale cress	plasma membrane	73.08	70.19
AT4G18790.1	Thale cress	plasma membrane	64.64	62.08
AT1G15960.1	Thale cress	plasma membrane	37.13	35.86
AT1G80830.1	Thale cress	plastid	36.74	35.15
Bra039185.1-P	Field mustard	cytosol	89.19	34.92
AT5G03280.1	Thale cress	plasma membrane	20.43	8.04

Protein Annotations

MapMan:24.2.3.10	EntrezGene:816847	ProteinID:AAB87118.1	ProteinID:AAM14929.1	ProteinID:AEC07422.1	EMBL:AF202539
ArrayExpress:AT2G23150	EnsemblPlantsGene:AT2G23150	RefSeq:AT2G23150	TAIR:AT2G23150	RefSeq:AT2G23150-TAIR-G	EnsemblPlants:AT2G23150.1
TAIR:AT2G23150.1	EMBL:AY058203	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005794	GO:GO:0006810
GO:GO:0006811	GO:GO:0006828	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009506
GO:GO:0009605	GO:GO:0009607	GO:GO:0009617	GO:GO:0009987	GO:GO:0010043	GO:GO:0016020
GO:GO:0016021	GO:GO:0030001	GO:GO:0042742	GO:GO:0046873	GO:GO:0055072	GO:GO:2000379
HAMAP:MF_00221	RefSeq:NP_179896.1	Symbol:NRAMP3	InterPro:NRAMP_fam	PFAM:PF01566	PO:PO:0000005
PO:PO:0000013	PO:PO:0000036	PO:PO:0000037	PO:PO:0000039	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020124
PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PRINTS:PR00447	PANTHER:PTHR11706
PANTHER:PTHR11706:SF46	UniProt:Q9SNV9	TIGRFAMs:TIGR01197	TMHMM:TMhelix	UniParc:UPI00000A9005	SEG:seg

Description

NRAMP3Metal transporter Nramp3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SNV9]

Coordinates

chr2:-:9856149..9858778

Molecular Weight (calculated)

56141.1 Da

IEP (calculated)

4.847

GRAVY (calculated)

0.550

Length

509 amino acids

Sequence
(BLAST)

001: MPQLENNEPL LINEEEEEET AYDETEKVHI VRNEEEDDLE HGVGCGGAPP FSWKKLWLFT GPGFLMSIAF LDPGNLEGDL QAGAVAGYSL LWLLMWATAM
101: GLLVQLLSAR LGVATGRHLA ELCRDEYPTW ARMVLWVMAE LALIGSDIQE VIGSAIAIKI LSNGILPLWA GVVITALDCF VFLFLENYGI RKLEAVFAVL
201: IATMGVSFAW MFGQAKPSGS ELLIGILVPK LSSRTIQKAV GVVGCIIMPH NVFLHSALVQ SREVDKRQKY RVQEALNYYT IESTIALFIS FLINLFVTTV
301: FAKGFYNTDL ANSIGLVNAG QYLQEKYGGG VFPILYIWAI GLLAAGQSST ITGTYAGQFI MGGFLNFKMK KWLRALITRS CAIIPTIIVA LVFDSSEATL
401: DVLNEWLNVL QSIQIPFALI PLLCLVSKEQ IMGSFKIGPL YKTIAWLVAA LVIMINGYLL LEFFSNEVSG IVYTGFVTLF TASYGAFILY LIARGITFTP
501: WPFKAESSH

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.