Factsheet for AT5G67330.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012154.1-P	Field mustard	peroxisome	95.12	95.12
CDY57441	Canola	peroxisome	95.12	95.12
AT2G23150.1	Thale cress	plasma membrane	75.39	75.83
KRH28413	Soybean	plasma membrane	74.41	75.3
KRH77065	Soybean	plasma membrane	74.22	74.95
CDY12837	Canola	nucleus	95.12	73.12
KRH04493	Soybean	peroxisome	73.24	72.67
KRH58028	Soybean	plasma membrane	72.85	72.29
VIT_07s0129g00620.t01	Wine grape	plasma membrane	73.24	72.12
Solyc02g092800.2.1	Tomato	cytosol, peroxisome, plasma membrane	71.68	72.1
PGSC0003DMT400064287	Potato	cytosol, nucleus, plasma membrane	71.68	71.26
AT1G47240.1	Thale cress	plasma membrane	69.73	67.36
AT4G18790.1	Thale cress	plasma membrane	61.13	59.06
AT1G15960.1	Thale cress	plasma membrane	37.5	36.43
AT1G80830.1	Thale cress	plastid	36.91	35.53
AT5G03280.1	Thale cress	plasma membrane	20.12	7.96

Protein Annotations

MapMan:24.2.3.10	EntrezGene:836868	ProteinID:AED98329.1	EMBL:AF202540	EMBL:AK226381	ArrayExpress:AT5G67330
EnsemblPlantsGene:AT5G67330	RefSeq:AT5G67330	TAIR:AT5G67330	RefSeq:AT5G67330-TAIR-G	EnsemblPlants:AT5G67330.1	TAIR:AT5G67330.1
Symbol:ATNRAMP4	EMBL:AY136467	ProteinID:BAB09018.1	EMBL:BT003406	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774
GO:GO:0006810	GO:GO:0006811	GO:GO:0006828	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009605	GO:GO:0009607	GO:GO:0009624	GO:GO:0009987	GO:GO:0010039	GO:GO:0016020
GO:GO:0016021	GO:GO:0030001	GO:GO:0042742	GO:GO:0046873	GO:GO:0055072	GO:GO:2000379
HAMAP:MF_00221	RefSeq:NP_201534.1	InterPro:NRAMP_fam	PFAM:PF01566	PO:PO:0000013	PO:PO:0000026
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0003011	PO:PO:0004507	PO:PO:0006056	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007131	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PRINTS:PR00447	PANTHER:PTHR11706	PANTHER:PTHR11706:SF46	UniProt:Q9FN18
TIGRFAMs:TIGR01197	TMHMM:TMhelix	UniParc:UPI000000BFFC	SEG:seg	:	:

Description

NRAMP4Metal transporter Nramp4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN18]

Coordinates

chr5:+:26861266..26863897

Molecular Weight (calculated)

56388.4 Da

IEP (calculated)

4.723

GRAVY (calculated)

0.554

Length

512 amino acids

Sequence
(BLAST)

001: MSETDRERPL LASEERAYEE TEKVLIVGID EEEDADYDDD PGNSPKFSWK KLWLFTGPGF LMSIAFLDPG NLESDLQAGA IAGYSLIWLL MWATAIGLLI
101: QLLSARLGVA TGRHLAELCR EEYPTWARMV LWIMAEIALI GADIQEVIGS AIAIKILSNG LVPLWAGVVI TALDCFIFLF LENYGIRKLE AVFAILIATM
201: ALAFAWMFGQ TKPSGTELLV GALVPKLSSR TIKQAVGIVG CIIMPHNVFL HSALVQSREV DPKKRFRVKE ALKYYSIEST GALAVSFIIN VFVTTVFAKS
301: FYGTEIADTI GLANAGQYLQ DKYGGGFFPI LYIWAIGVLA AGQSSTITGT YAGQFIMGGF LNLKMKKWVR ALITRSCAII PTMIVALVFD SSDSMLDELN
401: EWLNVLQSVQ IPFAVIPLLC LVSNEQIMGS FKIQPLVQTI SWIVAALVIA INGYLMVDFF SGAATNLILL VPVIIFAIAY VVFVLYLISR GLTYTPWQLV
501: ASSHKEPQRD DE

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.